RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 CACYBPQ9HB71 228 aaKnown RBP17.82■□□□□ 0.44
CPSF7-209ENST00000463244 GAAP10253 952 aa17.81■□□□□ 0.44
CPSF7-209ENST00000463244 EGR1P18146 543 aa17.81■□□□□ 0.44
CPSF7-209ENST00000463244 GRPRP30550 384 aa17.81■□□□□ 0.44
CPSF7-209ENST00000463244 SEC24CP53992 1094 aa17.81■□□□□ 0.44
CPSF7-209ENST00000463244 TMEM33P57088 247 aa17.81■□□□□ 0.44
CPSF7-209ENST00000463244 ZNF311Q5JNZ3 666 aa17.81■□□□□ 0.44
CPSF7-209ENST00000463244 REP15Q6BDI9 236 aa17.81■□□□□ 0.44
CPSF7-209ENST00000463244 SHQ1Q6PI26 577 aaKnown RBP17.81■□□□□ 0.44
CPSF7-209ENST00000463244 C5orf46Q6UWT4 87 aa17.81■□□□□ 0.44
CPSF7-209ENST00000463244 ZNF627Q7L945 461 aa17.81■□□□□ 0.44
CPSF7-209ENST00000463244 C20orf196Q8IYI0 205 aa17.81■□□□□ 0.44
CPSF7-209ENST00000463244 ADPRHL1Q8NDY3 354 aa17.81■□□□□ 0.44
CPSF7-209ENST00000463244 SLC38A4Q969I6 547 aa17.81■□□□□ 0.44
CPSF7-209ENST00000463244 LRRC37BQ96QE4 947 aa17.81■□□□□ 0.44
CPSF7-209ENST00000463244 SYT3Q9BQG1 590 aa17.81■□□□□ 0.44
CPSF7-209ENST00000463244 TMEM109Q9BVC6 243 aa17.81■□□□□ 0.44
CPSF7-209ENST00000463244 ZNF275Q9NSD4 429 aaPredicted RBP17.81■□□□□ 0.44
CPSF7-209ENST00000463244 THUMPD1Q9NXG2 353 aaKnown RBP17.81■□□□□ 0.44
CPSF7-209ENST00000463244 TREM2Q9NZC2 230 aa17.81■□□□□ 0.44
CPSF7-209ENST00000463244 TMEM89A2RUT3 159 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 TM9SF1O15321 606 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 RGS9O75916 674 aaPredicted RBP17.8■□□□□ 0.44
CPSF7-209ENST00000463244 IL6P05231 212 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 ZCCHC18P0CG32 403 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 CD79AP11912 226 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 HILS1P60008 231 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 VSNL1P62760 191 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 MRPS11P82912 194 aaKnown RBP17.8■□□□□ 0.44
CPSF7-209ENST00000463244 PIGFQ07326 219 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 TRMT5Q32P41 509 aaKnown RBP17.8■□□□□ 0.44
CPSF7-209ENST00000463244 ZNF813Q6ZN06 617 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 USP43Q70EL4 1123 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 NET1Q7Z628 596 aaPredicted RBP17.8■□□□□ 0.44
CPSF7-209ENST00000463244 LRP11Q86VZ4 500 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 C3orf56Q8N813 242 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 OR51F2Q8NH61 342 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 SGMS2Q8NHU3 365 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 FAM216AQ8WUB2 273 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 YIPF5Q969M3 257 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 VPS33AQ96AX1 596 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 LRR1Q96L50 414 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 SSU72Q9NP77 194 aaKnown RBP17.8■□□□□ 0.44
CPSF7-209ENST00000463244 ZNF224Q9NZL3 707 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 MYEF2Q9P2K5 600 aaKnown RBP17.8■□□□□ 0.44
CPSF7-209ENST00000463244 PCDHB10Q9UN67 800 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 NOX1Q9Y5S8 564 aa17.8■□□□□ 0.44
CPSF7-209ENST00000463244 IGKV1D-42A0A075B6H8 117 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 TRAV36DV7A0A075B6V5 113 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 TMEM247A6NEH6 219 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 MS4A18H0YCH9 400 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 NCR1O76036 304 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 ANP32DO95626 131 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 HPRP00739 348 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 HLA-DOBP13765 273 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 EPHA3P29320 983 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 LMO4P61968 165 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 RPS23P62266 143 aaKnown RBP17.79■□□□□ 0.44
CPSF7-209ENST00000463244 STX3Q13277 289 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 MAD2L1BPQ15013 274 aaPredicted RBP17.79■□□□□ 0.44
CPSF7-209ENST00000463244 FXNQ16595 210 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 MS4A18Q3C1V0 323 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 GTDC1Q4AE62 458 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 CARD17Q5XLA6 110 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 THSD4Q6ZMP0 1018 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 UEVLDQ8IX04 471 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 LSMEM1Q8N8F7 131 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 GCDHQ92947 438 aaPredicted RBP17.79■□□□□ 0.44
CPSF7-209ENST00000463244 WDR55Q9H6Y2 383 aaPredicted RBP17.79■□□□□ 0.44
CPSF7-209ENST00000463244 BCL2L10Q9HD36 194 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 RPS6KB2Q9UBS0 482 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 TGP01266 2768 aa17.79■□□□□ 0.44
CPSF7-209ENST00000463244 TRAV20A0A0B4J274 112 aa17.78■□□□□ 0.44
CPSF7-209ENST00000463244 RP2O75695 350 aa17.78■□□□□ 0.44
CPSF7-209ENST00000463244 PNPP00491 289 aa17.78■□□□□ 0.44
CPSF7-209ENST00000463244 GIPRP48546 466 aa17.78■□□□□ 0.44
CPSF7-209ENST00000463244 PTDSS1P48651 473 aaKnown RBP17.78■□□□□ 0.44
CPSF7-209ENST00000463244 AQP5P55064 265 aa17.78■□□□□ 0.44
CPSF7-209ENST00000463244 GALK2Q01415 458 aa17.78■□□□□ 0.44
CPSF7-209ENST00000463244 BST1Q10588 318 aa17.78■□□□□ 0.44
CPSF7-209ENST00000463244 MFSD13AQ14CX5 517 aa17.78■□□□□ 0.44
CPSF7-209ENST00000463244 GKAP1Q5VSY0 366 aaPredicted RBP17.78■□□□□ 0.44
CPSF7-209ENST00000463244 C1orf229Q6ZS94 237 aaPredicted RBP17.78■□□□□ 0.44
CPSF7-209ENST00000463244 PEG10Q86TG7 708 aaKnown RBP17.78■□□□□ 0.44
CPSF7-209ENST00000463244 AENQ8WTP8 325 aaKnown RBP17.78■□□□□ 0.44
CPSF7-209ENST00000463244 SLC41A3Q96GZ6 507 aa17.78■□□□□ 0.44
CPSF7-209ENST00000463244 EMC6Q9BV81 110 aa17.78■□□□□ 0.44
CPSF7-209ENST00000463244 DENND2DQ9H6A0 471 aaPredicted RBP17.78■□□□□ 0.44
CPSF7-209ENST00000463244 KLHL14Q9P2G3 628 aa17.78■□□□□ 0.44
CPSF7-209ENST00000463244 FZR1Q9UM11 496 aa17.78■□□□□ 0.44
CPSF7-209ENST00000463244 POFUT2Q9Y2G5 429 aa17.78■□□□□ 0.44
CPSF7-209ENST00000463244 A0A1B0GWA3 101 aa17.77■□□□□ 0.44
CPSF7-209ENST00000463244 TRIM77I1YAP6 450 aa17.77■□□□□ 0.44
CPSF7-209ENST00000463244 PPIHO43447 177 aaKnown RBP17.77■□□□□ 0.44
CPSF7-209ENST00000463244 SLC22A3O75751 556 aa17.77■□□□□ 0.44
CPSF7-209ENST00000463244 NUDT7P0C024 238 aa17.77■□□□□ 0.44
CPSF7-209ENST00000463244 NAT2P11245 290 aa17.77■□□□□ 0.44
CPSF7-209ENST00000463244 B4GALT1P15291 398 aa17.77■□□□□ 0.44
CPSF7-209ENST00000463244 NQO1P15559 274 aaKnown RBP17.77■□□□□ 0.44
CPSF7-209ENST00000463244 EPHA1P21709 976 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms