RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 A0A096LNT2 108 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 LRRN3E7EW58 273 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 M0R3G1 203 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 PLPP3O14495 311 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 CHP2O43745 196 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 CD5LO43866 347 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 CRLF1O75462 422 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 LYPD3O95274 346 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 MT-ATP6P00846 226 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 TP53P04637 393 aaPredicted RBP16.47■□□□□ 0.23
VARS-220ENST00000461874 CBR1P16152 277 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 CD247P20963 164 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 POU3F1Q03052 451 aaPredicted RBP16.47■□□□□ 0.23
VARS-220ENST00000461874 PUDPQ08623 228 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 VMACQ2NL98 169 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 ENTPD8Q5MY95 495 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 INTS11Q5TA45 600 aaKnown RBP16.47■□□□□ 0.23
VARS-220ENST00000461874 CARD17Q5XLA6 110 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 NANOGP8Q6NSW7 305 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 PXKQ7Z7A4 578 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 RBM45Q8IUH3 476 aaKnown RBP16.47■□□□□ 0.23
VARS-220ENST00000461874 CCDC36Q8IYA8 594 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 ZNF525Q8N782 197 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 OR4D11Q8NGI4 311 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 TXNDC15Q96J42 360 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 LRR1Q96L50 414 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 EMC6Q9BV81 110 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 NANOGQ9H9S0 305 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 SEC61A2Q9H9S3 476 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 CA10Q9NS85 328 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 MED29Q9NX70 200 aa16.47■□□□□ 0.23
VARS-220ENST00000461874 CR1P17927 2039 aa16.46■□□□□ 0.23
VARS-220ENST00000461874 SLC35F4A4IF30 521 aa16.46■□□□□ 0.23
VARS-220ENST00000461874 ZNF503-AS2A6NEH8 195 aa16.46■□□□□ 0.23
VARS-220ENST00000461874 CPSF4LA6NMK7 179 aaKnown RBP16.46■□□□□ 0.23
VARS-220ENST00000461874 ZNF99A8MXY4 864 aaPredicted RBP16.46■□□□□ 0.23
VARS-220ENST00000461874 THY1P04216 161 aa16.46■□□□□ 0.23
VARS-220ENST00000461874 CELA3BP08861 270 aa16.46■□□□□ 0.23
VARS-220ENST00000461874 CALCRP30988 508 aa16.46■□□□□ 0.23
VARS-220ENST00000461874 SERPINF1P36955 418 aa16.46■□□□□ 0.23
VARS-220ENST00000461874 CYLC2Q14093 348 aaPredicted RBP16.46■□□□□ 0.23
VARS-220ENST00000461874 TRMT5Q32P41 509 aaKnown RBP16.46■□□□□ 0.23
VARS-220ENST00000461874 WDR88Q6ZMY6 472 aa16.46■□□□□ 0.23
VARS-220ENST00000461874 CCDC80Q76M96 950 aa16.46■□□□□ 0.23
VARS-220ENST00000461874 OR4F15Q8NGB8 312 aa16.46■□□□□ 0.23
VARS-220ENST00000461874 VANGL1Q8TAA9 524 aaPredicted RBP16.46■□□□□ 0.23
VARS-220ENST00000461874 ARFGEF3Q5TH69 2177 aa16.45■□□□□ 0.22
VARS-220ENST00000461874 KIAA1324LA8MWY0 1029 aaPredicted RBP16.45■□□□□ 0.22
VARS-220ENST00000461874 TLX2O43763 284 aaPredicted RBP16.45■□□□□ 0.22
VARS-220ENST00000461874 F12P00748 615 aaPredicted RBP16.45■□□□□ 0.22
VARS-220ENST00000461874 AHCYP23526 432 aa16.45■□□□□ 0.22
VARS-220ENST00000461874 ARR3P36575 388 aa16.45■□□□□ 0.22
VARS-220ENST00000461874 CRYBA2P53672 197 aa16.45■□□□□ 0.22
VARS-220ENST00000461874 ADIPOQQ15848 244 aa16.45■□□□□ 0.22
VARS-220ENST00000461874 MYPOPQ86VE0 399 aaPredicted RBP16.45■□□□□ 0.22
VARS-220ENST00000461874 TSPYL5Q86VY4 417 aaPredicted RBP16.45■□□□□ 0.22
VARS-220ENST00000461874 WDFY1Q8IWB7 410 aa16.45■□□□□ 0.22
VARS-220ENST00000461874 OR5J2Q8NH18 312 aa16.45■□□□□ 0.22
VARS-220ENST00000461874 SLC26A7Q8TE54 656 aa16.45■□□□□ 0.22
VARS-220ENST00000461874 ADAMTS16Q8TE57 1224 aa16.45■□□□□ 0.22
VARS-220ENST00000461874 FAM168AQ92567 244 aa16.45■□□□□ 0.22
VARS-220ENST00000461874 LRRC58Q96CX6 371 aa16.45■□□□□ 0.22
VARS-220ENST00000461874 SH3GL1Q99961 368 aa16.45■□□□□ 0.22
VARS-220ENST00000461874 PCDHAC1Q9H158 963 aa16.45■□□□□ 0.22
VARS-220ENST00000461874 B3GAT2Q9NPZ5 323 aa16.45■□□□□ 0.22
VARS-220ENST00000461874 MRGBPQ9NV56 204 aa16.45■□□□□ 0.22
VARS-220ENST00000461874 TRAPPC13A5PLN9 417 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 ZNF726A6NNF4 738 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 B9A039 149 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 FXYD1O00168 92 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 GPRIN2O60269 458 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 SEC14L2O76054 403 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 PDE5AO76074 875 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 LY6HO94772 140 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 CSF3P09919 207 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 OR4A8P0C604 315 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 ADORA3P0DMS8 318 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 TROVE2P10155 538 aaKnown RBP eCLIP16.44■□□□□ 0.22
VARS-220ENST00000461874 SLC25A16P16260 332 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 IDH3GP51553 393 aaPredicted RBP16.44■□□□□ 0.22
VARS-220ENST00000461874 ARFIP2P53365 341 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 SNRPD2P62316 118 aaKnown RBP16.44■□□□□ 0.22
VARS-220ENST00000461874 HGFACQ04756 655 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 LOXL1Q08397 574 aaPredicted RBP16.44■□□□□ 0.22
VARS-220ENST00000461874 CAMK2DQ13557 499 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 ZNF74Q16587 644 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 RABL3Q5HYI8 236 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 COQ5Q5HYK3 327 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 TTC33Q6PID6 262 aaPredicted RBP16.44■□□□□ 0.22
VARS-220ENST00000461874 MDP1Q86V88 176 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 CALHM3Q86XJ0 350 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 NUP37Q8NFH4 326 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 OR8J3Q8NGG0 315 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 C10orf105Q8TEF2 133 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 RASSF5Q8WWW0 418 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 NANOS1Q8WY41 292 aaKnown RBP16.44■□□□□ 0.22
VARS-220ENST00000461874 MPP4Q96JB8 637 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 TNFRSF13CQ96RJ3 184 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 YAE1D1Q9NRH1 226 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 FGFR1OP2Q9NVK5 253 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms