RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ACANP16112 2415 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 LOC102725191A0A1B0GVB3 256 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 ZNF726A6NNF4 738 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 MS4A18H0YCH9 400 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 H7C1Q1 480 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 PLPP3O14495 311 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 RNF13O43567 381 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 GMNNO75496 209 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 SERPINA1P01009 418 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 SOD3P08294 240 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 HLA-DOBP13765 273 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 PAX1P15863 534 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 NCK1P16333 377 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 RBM34P42696 430 aaKnown RBP13.48□□□□□ -0.25
VARS-219ENST00000461328 SH3BGRP55822 239 aaPredicted RBP13.48□□□□□ -0.25
VARS-219ENST00000461328 SELENOWP63302 87 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 MXRA7P84157 204 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 MS4A18Q3C1V0 323 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 VTCN1Q7Z7D3 282 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 NKAIN4Q8IVV8 208 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 OR1K1Q8NGR3 316 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 PFN4Q8NHR9 129 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 TMEM255BQ8WV15 326 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 GEMIN6Q8WXD5 167 aaKnown RBP13.48□□□□□ -0.25
VARS-219ENST00000461328 PRRC1Q96M27 445 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 OR2M2Q96R28 347 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 SMR3AQ99954 134 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 BDH2Q9BUT1 245 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 EMC6Q9BV81 110 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 B3GAT2Q9NPZ5 323 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 MED29Q9NX70 200 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 ABCD2Q9UBJ2 740 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 ZNF229Q9UJW7 825 aa13.48□□□□□ -0.25
VARS-219ENST00000461328 SETD2Q9BYW2 2564 aaPredicted RBP13.48□□□□□ -0.25
VARS-219ENST00000461328 A0A096LPE4 126 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 A0A1W2PPZ6 126 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 SHISA9B4DS77 424 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 M0R3G1 203 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 ZNF432O94892 652 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 DANCRP0C864 163 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 PTAFRP25105 342 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 YAP1P46937 504 aaKnown RBP13.47□□□□□ -0.25
VARS-219ENST00000461328 UGT2B15P54855 530 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 ST3GAL3Q11203 375 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 TBRG1Q3YBR2 411 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 IFI44LQ53G44 452 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 SLC22A25Q6T423 547 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 LINGO2Q7L985 606 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 PXKQ7Z7A4 578 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 DEPDC4Q8N2C3 294 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 WDR31Q8NA23 367 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 ANKK1Q8NFD2 765 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 OR6N1Q8NGY5 312 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 TMEM239Q8WW34 195 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 SGTBQ96EQ0 304 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 TRMT61AQ96FX7 289 aaKnown RBP13.47□□□□□ -0.25
VARS-219ENST00000461328 RADILQ96JH8 1075 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 HSH2DQ96JZ2 352 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 PRSS27Q9BQR3 290 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 ZNF426Q9BUY5 554 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 FAIMQ9NVQ4 179 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 CISD1Q9NZ45 108 aaKnown RBP13.47□□□□□ -0.25
VARS-219ENST00000461328 TAGLN3Q9UI15 199 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 MGAT4BQ9UQ53 548 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 MED31Q9Y3C7 131 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 ARID1AO14497 2285 aa13.47□□□□□ -0.25
VARS-219ENST00000461328 NF1P21359 2839 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 SLC35F4A4IF30 521 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 TRIM64A6NGJ6 449 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 TRIM64BA6NI03 449 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 FAM171A2A8MVW0 826 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 SMAD7O15105 426 aaKnown RBP13.46□□□□□ -0.25
VARS-219ENST00000461328 MT-ND1P03886 318 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 THRBP10828 461 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 CD40P25942 277 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 CAPZA2P47755 286 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 BIDP55957 195 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 SLC25A3Q00325 362 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 SPOCK1Q08629 439 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 CAMK2DQ13557 499 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 CEACAM16Q2WEN9 425 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 PGGHGQ32M88 737 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 ANKRD16Q6P6B7 361 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 CBLL1Q75N03 491 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 PIGWQ7Z7B1 504 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 TMEM123Q8N131 208 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 CIARTQ8N365 385 aaPredicted RBP13.46□□□□□ -0.25
VARS-219ENST00000461328 LRRC17Q8N6Y2 441 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 RNF148Q8N7C7 305 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 TXNDC15Q96J42 360 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 COX4I2Q96KJ9 171 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 HS6ST2Q96MM7 605 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 KCNS3Q9BQ31 491 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 FNDC11Q9BVV2 318 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 ULBP2Q9BZM5 246 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 CRLF2Q9HC73 371 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 GPR35Q9HC97 309 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 OBP2BQ9NPH6 170 aa13.46□□□□□ -0.25
VARS-219ENST00000461328 MEPEQ9NQ76 525 aaPredicted RBP13.46□□□□□ -0.25
VARS-219ENST00000461328 EGFL7Q9UHF1 273 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms