RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 PLBD1Q6P4A8 553 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 ARSKQ6UWY0 536 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 MEPCEQ7L2J0 689 aaKnown RBP8.06□□□□□ -1.12
VPS50-207ENST00000458530 CLVS1Q8IUQ0 354 aaPredicted RBP8.06□□□□□ -1.12
VPS50-207ENST00000458530 CPOQ8IVL8 374 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 ALDH16A1Q8IZ83 802 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 GALNT16Q8N428 558 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 WDSUB1Q8N9V3 476 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 ADPRHL1Q8NDY3 354 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 OR9Q1Q8NGQ5 310 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 OR13F1Q8NGS4 319 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 RAB2BQ8WUD1 216 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 FAR1Q8WVX9 515 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 PSMF1Q92530 271 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 SLC25A36Q96CQ1 311 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 RNFT2Q96EX2 444 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 JSRP1Q96MG2 331 aaPredicted RBP8.06□□□□□ -1.12
VPS50-207ENST00000458530 C5orf34Q96MH7 638 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 MOGAT1Q96PD6 335 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 SNX18Q96RF0 628 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 FAM173AQ9BQD7 235 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 KATNB1Q9BVA0 655 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 PTDSS2Q9BVG9 487 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 RNF32Q9H0A6 362 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 AMBNQ9NP70 447 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 FGF20Q9NP95 211 aaPredicted RBP8.06□□□□□ -1.12
VPS50-207ENST00000458530 HINT3Q9NQE9 182 aaKnown RBP8.06□□□□□ -1.12
VPS50-207ENST00000458530 LRFN1Q9P244 771 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 IL20RAQ9UHF4 553 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 B3GALT5Q9Y2C3 310 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 GPR52Q9Y2T5 361 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 KLF13Q9Y2Y9 288 aaPredicted RBP8.06□□□□□ -1.12
VPS50-207ENST00000458530 MRPS18CQ9Y3D5 142 aaKnown RBP8.06□□□□□ -1.12
VPS50-207ENST00000458530 PCDHGB7Q9Y5F8 929 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 IER3IP1Q9Y5U9 82 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 COMMD3-BMI1R4GMX3 469 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 FREM3P0C091 2139 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 POLQO75417 2590 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 CELSR2Q9HCU4 2923 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 A6NIZ1 184 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 NPIPB13A6NJU9 1138 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 C17orf51A8MQB3 221 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 NPIPB4C9JG80 1138 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 DNPH1O43598 174 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 FZD7O75084 574 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 TXNDC12O95881 172 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 IGHMP01871 453 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 ADORA3P0DMS8 318 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 GRPRP30550 384 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 AQP2P41181 271 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 CENPAP49450 140 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 BLVRAP53004 296 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 TMBIM6P55061 237 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 RAP1BP61224 184 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 RAP1AP62834 184 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 CSNK2A1P68400 391 aaPredicted RBP8.05□□□□□ -1.12
VPS50-207ENST00000458530 SLC35A1P78382 337 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 PUDPQ08623 228 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 ZP4Q12836 540 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 ITGADQ13349 1161 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 KRR1Q13601 381 aaKnown RBP8.05□□□□□ -1.12
VPS50-207ENST00000458530 FHL1Q13642 323 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 CRMP1Q14194 572 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 IRF3Q14653 427 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 OR7A5Q15622 319 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 TIMM50Q3ZCQ8 353 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 RAET1LQ5VY80 246 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 B3GNTL1Q67FW5 361 aaPredicted RBP8.05□□□□□ -1.12
VPS50-207ENST00000458530 SLC6A19Q695T7 634 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 HIST2H2BCQ6DN03 193 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 GTF2IRD2BQ6EKJ0 949 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 H1FNTQ75WM6 255 aaPredicted RBP8.05□□□□□ -1.12
VPS50-207ENST00000458530 GTF2IRD2Q86UP8 949 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 LRRC17Q8N6Y2 441 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 POMGNT2Q8NAT1 580 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 SLC37A3Q8NCC5 494 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 PROKR2Q8NFJ6 384 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 OR52E2Q8NGJ4 325 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 OR52I1Q8NGK6 324 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 NTNG2Q96CW9 530 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 ZHX1-C8orf76Q96EF9 292 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 JAM3Q9BX67 310 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 RBM38Q9H0Z9 239 aaKnown RBP8.05□□□□□ -1.12
VPS50-207ENST00000458530 ZFP64Q9NPA5 681 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 CHST11Q9NPF2 352 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 KLHL1Q9NR64 748 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 HAO2Q9NYQ3 351 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 TNFRSF10DQ9UBN6 386 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 PLEKHB1Q9UF11 243 aaPredicted RBP8.05□□□□□ -1.12
VPS50-207ENST00000458530 FBXL2Q9UKC9 423 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 MOKQ9UQ07 419 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 TRAPPC4Q9Y296 219 aa8.05□□□□□ -1.12
VPS50-207ENST00000458530 CACNA1DQ01668 2161 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 MED13Q9UHV7 2174 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 TEX13CA0A0J9YWL9 993 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 A0A1W2PNV4 684 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 TMEM129A0AVI4 362 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 ZC3H12DA2A288 527 aaKnown RBP8.04□□□□□ -1.12
VPS50-207ENST00000458530 OR5H15A6NDH6 313 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 ARGFXA6NJG6 315 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms