RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 SLC6A19Q695T7 634 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 UNQ6494/PRO21346Q6UXR6 183 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 GSG1LQ6UXU4 331 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 TMUB2Q71RG4 321 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 OLIG3Q7RTU3 272 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 TMPRSS7Q7RTY8 843 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 CCDC116Q8IYX3 515 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 AMER3Q8N944 861 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 MFSD9Q8NBP5 474 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 BEST4Q8NFU0 473 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 OR5J2Q8NH18 312 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 OR52I2Q8NH67 350 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 HAVCR1Q96D42 359 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 PELI1Q96FA3 418 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 S100A16Q96FQ6 103 aaKnown RBP9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 ART5Q96L15 291 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 PRAP1Q96NZ9 151 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 TBX5Q99593 518 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 DUSP23Q9BVJ7 150 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 DPH1Q9BZG8 443 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 ZNF350Q9GZX5 532 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 SLITRK2Q9H156 845 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 AUNIPQ9H7T9 357 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 MYOZ1Q9NP98 299 aaPredicted RBP9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 TAS2R10Q9NYW0 307 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 FOXJ3Q9UPW0 622 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 ZNF175Q9Y473 711 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 NCOR2Q9Y618 2525 aa9.17□□□□□ -0.94
CHCHD4P3-201ENST00000455954 SPTBN2O15020 2390 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 TMEM8BA6NDV4 472 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 HSPB2A8KAH6 182 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 F5H5P2 479 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 ERI3O43414 337 aaKnown RBP9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 LCMT2O60294 686 aaKnown RBP9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 ZNF432O94892 652 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 PCCBP05166 539 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 CSF1P09603 554 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 GIMD1P0DJR0 217 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 NID1P14543 1247 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 ACP1P24666 158 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 ACVR1BP36896 505 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 RAD52P43351 418 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 PTH2RP49190 550 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 BLKP51451 505 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 OR12D2P58182 307 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 RPS11P62280 158 aaKnown RBP eCLIP9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 S100A12P80511 92 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 MAT1AQ00266 395 aaKnown RBP9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 DUSP2Q05923 314 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 DBPQ10586 325 aaPredicted RBP9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 ZNF169Q14929 603 aaPredicted RBP9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 RBMS2Q15434 407 aaKnown RBP9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 OR1Q1Q15612 314 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 HSPB2Q16082 182 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 SLC25A25Q6KCM7 469 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 DHRS13Q6UX07 377 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 APOOLQ6UXV4 268 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 SLC36A1Q7Z2H8 476 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 KRT77Q7Z794 578 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 TMEM17Q86X19 198 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 SLC35F2Q8IXU6 374 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 CCDC36Q8IYA8 594 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 LINC00518Q8N0U6 118 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 OR2L13Q8N349 312 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 LRRC25Q8N386 305 aaPredicted RBP9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 LMNTD1Q8N9Z9 388 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 CLRN3Q8NCR9 226 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 OR4D9Q8NGE8 314 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 OR14A16Q8NHC5 309 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 LMX1AQ8TE12 382 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 CNOT9Q92600 299 aaKnown RBP9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 GAL3ST3Q96A11 431 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 MIB2Q96AX9 1013 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 BPIFA2Q96DR5 249 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 SLC25A38Q96DW6 304 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 STACQ99469 402 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 SEC22CQ9BRL7 303 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 APOOQ9BUR5 198 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 ZNF416Q9BWM5 594 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 HCAR1Q9BXC0 346 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 QRSL1Q9H0R6 528 aaKnown RBP9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 ALX4Q9H161 411 aaPredicted RBP9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 OR10A4Q9H209 315 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 MED20Q9H944 212 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 PCDHB16Q9NRJ7 776 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 OPN4Q9UHM6 478 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 MRPS7Q9Y2R9 242 aaKnown RBP9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 ATG4BQ9Y4P1 393 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 HRH3Q9Y5N1 445 aa9.16□□□□□ -0.94
CHCHD4P3-201ENST00000455954 A0A0D9SG52 128 aa9.15□□□□□ -0.94
CHCHD4P3-201ENST00000455954 A0A1B0GVC2 190 aa9.15□□□□□ -0.94
CHCHD4P3-201ENST00000455954 A6NIN4 97 aa9.15□□□□□ -0.94
CHCHD4P3-201ENST00000455954 A8MUA0 341 aa9.15□□□□□ -0.94
CHCHD4P3-201ENST00000455954 K7ESM1 405 aa9.15□□□□□ -0.94
CHCHD4P3-201ENST00000455954 AGRPO00253 132 aa9.15□□□□□ -0.94
CHCHD4P3-201ENST00000455954 PRICKLE3O43900 615 aaPredicted RBP9.15□□□□□ -0.94
CHCHD4P3-201ENST00000455954 SELENOFO60613 162 aa9.15□□□□□ -0.94
CHCHD4P3-201ENST00000455954 PRAMEF2O60811 474 aa9.15□□□□□ -0.94
CHCHD4P3-201ENST00000455954 CTNSO60931 367 aa9.15□□□□□ -0.94
CHCHD4P3-201ENST00000455954 DNAJB6O75190 326 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms