RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ZNF346Q9UL40 294 aaKnown RBP17.21■□□□□ 0.34
RPS28-202ENST00000449223 RIIAD1A6NNX1 92 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 TLX2O43763 284 aaPredicted RBP17.2■□□□□ 0.34
RPS28-202ENST00000449223 CYTIPO60759 359 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 SLC2A10O95528 541 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 CHN2P52757 468 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 CSNK2BP67870 215 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 POU3F1Q03052 451 aaPredicted RBP17.2■□□□□ 0.34
RPS28-202ENST00000449223 KLRB1Q12918 225 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 MESTQ5EB52 335 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 UEVLDQ8IX04 471 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 GHDCQ8N2G8 530 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 TEX19Q8NA77 164 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 ZPLD1Q8TCW7 415 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 RNF128Q8TEB7 428 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 FAR1Q8WVX9 515 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 WBP1Q96G27 269 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 ZNF845Q96IR2 970 aaPredicted RBP17.2■□□□□ 0.34
RPS28-202ENST00000449223 Q96MT0 163 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 IL4I1Q96RQ9 567 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 PLCXD1Q9NUJ7 323 aa17.2■□□□□ 0.34
RPS28-202ENST00000449223 TEX13CA0A0J9YWL9 993 aa17.19■□□□□ 0.34
RPS28-202ENST00000449223 TRIM64A6NGJ6 449 aa17.19■□□□□ 0.34
RPS28-202ENST00000449223 ZNF716A6NP11 495 aa17.19■□□□□ 0.34
RPS28-202ENST00000449223 KDM4EB2RXH2 506 aaPredicted RBP17.19■□□□□ 0.34
RPS28-202ENST00000449223 TDGF1P3P51864 188 aa17.19■□□□□ 0.34
RPS28-202ENST00000449223 KRR1Q13601 381 aaKnown RBP17.19■□□□□ 0.34
RPS28-202ENST00000449223 RBM48Q5RL73 367 aaKnown RBP17.19■□□□□ 0.34
RPS28-202ENST00000449223 SLC35F1Q5T1Q4 408 aa17.19■□□□□ 0.34
RPS28-202ENST00000449223 AADACL4Q5VUY2 407 aa17.19■□□□□ 0.34
RPS28-202ENST00000449223 NXNL2Q5VZ03 156 aa17.19■□□□□ 0.34
RPS28-202ENST00000449223 SLC35D2Q76EJ3 337 aa17.19■□□□□ 0.34
RPS28-202ENST00000449223 HDDC2Q7Z4H3 204 aa17.19■□□□□ 0.34
RPS28-202ENST00000449223 KDM8Q8N371 416 aa17.19■□□□□ 0.34
RPS28-202ENST00000449223 NPEPL1Q8NDH3 523 aa17.19■□□□□ 0.34
RPS28-202ENST00000449223 ASB10Q8WXI3 467 aa17.19■□□□□ 0.34
RPS28-202ENST00000449223 RASD2Q96D21 266 aa17.19■□□□□ 0.34
RPS28-202ENST00000449223 LRR1Q96L50 414 aa17.19■□□□□ 0.34
RPS28-202ENST00000449223 SLX1AQ9BQ83 275 aa17.19■□□□□ 0.34
RPS28-202ENST00000449223 HINT3Q9NQE9 182 aaKnown RBP17.19■□□□□ 0.34
RPS28-202ENST00000449223 LUZP4Q9P127 313 aa17.19■□□□□ 0.34
RPS28-202ENST00000449223 IGKV3D-15A0A087WSY6 115 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 A6NIZ1 184 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 AHCYL1O43865 530 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 IFNGR1P15260 489 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 ZNF43P17038 809 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 RAP1BP61224 184 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 RAP1AP62834 184 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 SRYQ05066 204 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.18■□□□□ 0.34
RPS28-202ENST00000449223 CRMP1Q14194 572 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 FCRLAQ7L513 359 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 SLC37A3Q8NCC5 494 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 OR4K13Q8NH42 304 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 NMNAT2Q9BZQ4 307 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 CLN6Q9NWW5 311 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 AASSQ9UDR5 926 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 MCTS1Q9ULC4 181 aaKnown RBP17.18■□□□□ 0.34
RPS28-202ENST00000449223 GPR52Q9Y2T5 361 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 ZNF175Q9Y473 711 aa17.18■□□□□ 0.34
RPS28-202ENST00000449223 ALPK2Q86TB3 2170 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 IGHV3-15A0A0B4J1V0 119 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 A0A1B0GTH9 108 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 CENPBD1B2RD01 187 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 M0R3G1 203 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 SLC1A7O00341 560 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 PRODHO43272 600 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 TNFAIP8O95379 198 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 BCL10O95999 233 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 PLGP00747 810 aaPredicted RBP17.17■□□□□ 0.34
RPS28-202ENST00000449223 CDKN2AP42771 156 aaKnown RBP17.17■□□□□ 0.34
RPS28-202ENST00000449223 MLLT10P55197 1068 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 ITGADQ13349 1161 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 TOP3AQ13472 1001 aaPredicted RBP17.17■□□□□ 0.34
RPS28-202ENST00000449223 KCTD21Q4G0X4 260 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 PCSK4Q6UW60 755 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 CREB3L2Q70SY1 520 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 CXXC5Q7LFL8 322 aaKnown RBP17.17■□□□□ 0.34
RPS28-202ENST00000449223 FGD2Q7Z6J4 655 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 GPAT4Q86UL3 456 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 OR9K2Q8NGE7 335 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 OR52E2Q8NGJ4 325 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 OR6X1Q8NH79 312 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 PTP4A1Q93096 173 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 ADAD1Q96M93 576 aaKnown RBP17.17■□□□□ 0.34
RPS28-202ENST00000449223 RNF122Q9H9V4 155 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 VSX1Q9NZR4 365 aaPredicted RBP17.17■□□□□ 0.34
RPS28-202ENST00000449223 TNFRSF10DQ9UBN6 386 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 MYRFQ9Y2G1 1151 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 SPTA1P02549 2419 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 NBEAQ8NFP9 2946 aa17.17■□□□□ 0.34
RPS28-202ENST00000449223 PRR23D1E9PI22 279 aaPredicted RBP17.16■□□□□ 0.34
RPS28-202ENST00000449223 ENTPD6O75354 484 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 SYNGR4O95473 234 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 PRR23D2P0DMB1 279 aaPredicted RBP17.16■□□□□ 0.34
RPS28-202ENST00000449223 PAICSP22234 425 aaKnown RBP17.16■□□□□ 0.34
RPS28-202ENST00000449223 CRHBPP24387 322 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 SLC25A1P53007 311 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 PON3Q15166 354 aa17.16■□□□□ 0.34
RPS28-202ENST00000449223 CPOQ8IVL8 374 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms