RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 MSRB3Q8IXL7 192 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 ANKS4BQ8N8V4 417 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 SCAIQ8N9R8 606 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 OR6N1Q8NGY5 312 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 OR6S1Q8NH40 331 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 EBF4Q9BQW3 602 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 NELFAQ9H3P2 528 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 ZNF442Q9H7R0 627 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 SLCO1B3Q9NPD5 702 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 VAPAQ9P0L0 249 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 B3GAT1Q9P2W7 334 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 LEF1Q9UJU2 399 aaPredicted RBP10.23□□□□□ -0.77
TTC28-203ENST00000442232 POFUT2Q9Y2G5 429 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 SPEF1Q9Y4P9 236 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 NOX1Q9Y5S8 564 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 IGKV1D-42A0A075B6H8 117 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 A0A087WUJ7 227 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 IGHV2OR16-5A0A0B4J2B6 119 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 A0A0B4J2E0 115 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 LOC100289279A0A1B0GTE1 492 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 LOC102725191A0A1B0GVB3 256 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 A0A1B0GX12 115 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 ANGPT2O15123 496 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 TRAF3IP2O43734 574 aaPredicted RBP10.22□□□□□ -0.77
TTC28-203ENST00000442232 FZD7O75084 574 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 ENTPD5O75356 428 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 SERPINI2O75830 405 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 SEC14L2O76054 403 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 OR6A2O95222 327 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 RAB36O95755 333 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 C8BP07358 591 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 CD79AP11912 226 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 SRD5A1P18405 259 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 CALCRP30988 508 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 LSP1P33241 339 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 PUDPQ08623 228 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 SNTB2Q13425 540 aaKnown RBP10.22□□□□□ -0.77
TTC28-203ENST00000442232 DAG1Q14118 895 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 GSG1Q2KHT4 349 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 PAGE3Q5JUK9 113 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 DHDDSQ86SQ9 333 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 MDP1Q86V88 176 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 FUNDC1Q8IVP5 155 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 C20orf196Q8IYI0 205 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 TMEM123Q8N131 208 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 C11orf65Q8NCR3 313 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 NEU4Q8WWR8 484 aaPredicted RBP10.22□□□□□ -0.77
TTC28-203ENST00000442232 ATP6V1G3Q96LB4 118 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 ULBP2Q9BZM5 246 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 PLK3Q9H4B4 646 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 CHODLQ9H9P2 273 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 SEC61A2Q9H9S3 476 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 SLAMF8Q9P0V8 285 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 FBXL3Q9UKT7 428 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 TRIM33Q9UPN9 1127 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 CMAHPQ9Y471 501 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 MALRD1Q5VYJ5 2156 aa10.22□□□□□ -0.77
TTC28-203ENST00000442232 SLC35F4A4IF30 521 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 VWC2LB2RUY7 222 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 TPST1O60507 370 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 MT-ATP6P00846 226 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 CELA3BP08861 270 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 GPX2P18283 190 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 AHCYP23526 432 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 THBS4P35443 961 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 CSNK1A1P48729 337 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 RPS23P62266 143 aaKnown RBP10.21□□□□□ -0.77
TTC28-203ENST00000442232 GALK2Q01415 458 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 RBBP4Q09028 425 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 TRMT5Q32P41 509 aaKnown RBP10.21□□□□□ -0.77
TTC28-203ENST00000442232 GLIPR1L2Q4G1C9 344 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 KRT80Q6KB66 452 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 ZNF613Q6PF04 617 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 ZNF813Q6ZN06 617 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 SLC30A8Q8IWU4 369 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 SVOPLQ8N434 492 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 SMYD1Q8NB12 490 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 SLC26A7Q8TE54 656 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 CKAP2Q8WWK9 683 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 LRR1Q96L50 414 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 FOXN4Q96NZ1 517 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 MCHR1Q99705 422 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 CPPED1Q9BRF8 314 aaPredicted RBP10.21□□□□□ -0.77
TTC28-203ENST00000442232 TMEM43Q9BTV4 400 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 EMC6Q9BV81 110 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 DENND2DQ9H6A0 471 aaPredicted RBP10.21□□□□□ -0.77
TTC28-203ENST00000442232 NOX3Q9HBY0 568 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 MRPL39Q9NYK5 338 aaKnown RBP10.21□□□□□ -0.77
TTC28-203ENST00000442232 GMEB1Q9Y692 573 aa10.21□□□□□ -0.77
TTC28-203ENST00000442232 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.21□□□□□ -0.78
TTC28-203ENST00000442232 FBN1P35555 2871 aaKnown RBP10.2□□□□□ -0.78
TTC28-203ENST00000442232 TRBV5-3A0A0A0MS03 114 aa10.2□□□□□ -0.78
TTC28-203ENST00000442232 PHF1O43189 567 aaPredicted RBP10.2□□□□□ -0.78
TTC28-203ENST00000442232 CHP2O43745 196 aa10.2□□□□□ -0.78
TTC28-203ENST00000442232 FMO6PO60774 539 aa10.2□□□□□ -0.78
TTC28-203ENST00000442232 UBL3O95164 117 aa10.2□□□□□ -0.78
TTC28-203ENST00000442232 HLA-HP01893 362 aa10.2□□□□□ -0.78
TTC28-203ENST00000442232 BGLAPP02818 100 aa10.2□□□□□ -0.78
TTC28-203ENST00000442232 HIST1H2ABP04908 130 aa10.2□□□□□ -0.78
TTC28-203ENST00000442232 ADORA3P0DMS8 318 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms