RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, human

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-208	ENST00000442054	TINAG	Q9UJW2	476 aa		6.69	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	ZNF223	Q9UK11	482 aa	Predicted RBP	6.69	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	CARD8	Q9Y2G2	431 aa		6.69	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	IGLV3-12	A0A075B6K2	115 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	TRDV1	A0A1B0GX56	115 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	VSTM5	A8MXK1	200 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054		M0R3H8	397 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	CYR61	O00622	381 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	SURF4	O15260	269 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	CBR3	O75828	277 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	RAB36	O95755	333 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	CCL3	P10147	92 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	RPS4Y1	P22090	263 aa	Known RBP	6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	S100A1	P23297	94 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	GABRA5	P31644	462 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	KRR1	Q13601	381 aa	Known RBP	6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	LINC00303	Q3SY05	128 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	LIPK	Q5VXJ0	399 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	TMEM225	Q6GV28	225 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	GPAT4	Q86UL3	456 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	JAZF1	Q86VZ6	243 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	PLCZ1	Q86YW0	608 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	CDK20	Q8IZL9	346 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	TCEANC	Q8N8B7	351 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	GDPD1	Q8N9F7	314 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	OR2M7	Q8NG81	312 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	OR5D16	Q8NGK9	328 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	NUBPL	Q8TB37	319 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	DNAJA4	Q8WW22	397 aa	Predicted RBP	6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	HSD17B8	Q92506	261 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	CNRIP1	Q96F85	164 aa	Predicted RBP	6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	IMMP1L	Q96LU5	166 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	PRRC1	Q96M27	445 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	ZNF285	Q96NJ3	590 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	BBC3	Q96PG8	261 aa	Predicted RBP	6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	PIGQ	Q9BRB3	760 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	MARVELD1	Q9BSK0	173 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	PINK1	Q9BXM7	581 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	MMP28	Q9H239	520 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	IL20	Q9NYY1	176 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	P2RX2	Q9UBL9	471 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	CSAG2	Q9Y5P2	127 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	SIRT4	Q9Y6E7	314 aa	Predicted RBP	6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	MED13	Q9UHV7	2174 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	PRKCA	P17252	672 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	TBXA2R	P21731	343 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	MAP3K8	P41279	467 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	WNT4	P56705	351 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	SMUG1	Q53HV7	270 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	TIGD3	Q6B0B8	471 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	ZNF517	Q6ZMY9	492 aa	Predicted RBP	6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	RBMXL3	Q8N7X1	1067 aa	Known RBP	6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	HAVCR2	Q8TDQ0	301 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	RNF166	Q96A37	237 aa	Predicted RBP	6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	UPRT	Q96BW1	309 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	INTS12	Q96CB8	462 aa	Known RBP	6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	FYTTD1	Q96QD9	318 aa	Known RBP	6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	PRSS27	Q9BQR3	290 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	NDEL1	Q9GZM8	345 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	ZCCHC4	Q9H5U6	513 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	WDFY4	Q6ZS81	3184 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054		A0A1W2PQL4	384 aa	Predicted RBP	6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	ELOA3D	A6NLF2	546 aa	Predicted RBP	6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	CCNK	O75909	580 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	AK1	P00568	194 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	AHCY	P23526	432 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	IL32	P24001	234 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	ABCD3	P28288	659 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	SDC2	P34741	201 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	SOX6	P35712	828 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	EVX1	P49640	407 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	INSL4	Q14641	139 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	P2RY14	Q15391	338 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	ELOA3B	Q3SY89	546 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	SPANXN2	Q5MJ10	180 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	DCST1	Q5T197	706 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	OR2G6	Q5TZ20	316 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	SLC30A6	Q6NXT4	461 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	MARCH3	Q86UD3	253 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	ZNF321P	Q8N8H1	164 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	ELOA3	Q8NG57	546 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	OR52P1P	Q8NH57	321 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	SFXN5	Q8TD22	340 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	PTPMT1	Q8WUK0	201 aa	Predicted RBP	6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	TTC9	Q92623	222 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	HOXB13	Q92826	284 aa	Predicted RBP	6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	ELP4	Q96EB1	424 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	RADIL	Q96JH8	1075 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	OR5B2	Q96R09	309 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	OR51I1	Q9H343	314 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	EGLN3	Q9H6Z9	239 aa		6.68	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	ICE1	Q9Y2F5	2266 aa		6.67	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	SYT5	O00445	386 aa		6.67	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	PRODH	O43272	600 aa		6.67	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	UTS2	O95399	124 aa		6.67	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	AHSA1	O95433	338 aa		6.67	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	HSMCR30	P0CW71	290 aa		6.67	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	SLC2A5	P22732	501 aa		6.67	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	S100A5	P33763	92 aa		6.67	□□□□□ -1.34
CDC42BPA-208	ENST00000442054	SLC9A3	P48764	834 aa		6.67	□□□□□ -1.34

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