RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 RYDENQ9NUL5 291 aaKnown RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 BABAM2Q9NXR7 383 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 QPCTLQ9NXS2 382 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 COPZ2Q9P299 210 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 C19orf25Q9UFG5 118 aaPredicted RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 CLEC2DQ9UHP7 191 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 TEKT2Q9UIF3 430 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 NXT1Q9UKK6 140 aaKnown RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 MRPS33Q9Y291 106 aaKnown RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SSUH2Q9Y2M2 353 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 TLN2Q9Y4G6 2542 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 TRGV8A0A0C4DH27 118 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 A0A0G2JMM0 328 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 C2orf92A0A1B0GVN3 265 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 A0A1W2PPB8 328 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 A0A1W2PRS3 328 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 CCDC182A6NF36 153 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 FABP12A6NFH5 140 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 KIR3DP1A8MWS1 328 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 CYR61O00622 381 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 CTDSPLO15194 276 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 GPRIN2O60269 458 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 PTP4A3O75365 173 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SLC43A1O75387 559 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SLC25A12O75746 678 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 MT-ND5P03915 603 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 CT62P0C5K7 136 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 RNF224P0DH78 156 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF3P17036 446 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 HK1P19367 917 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SLC2A5P22732 501 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 TRHRP34981 398 aaPredicted RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 TGFBR1P36897 503 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 CD96P40200 585 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SOX3P41225 446 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 DNASE1L1P49184 302 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 CENPAP49450 140 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SLC26A5P58743 744 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 PITPNAQ00169 270 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 DUSP2Q05923 314 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 LGALS3BPQ08380 585 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 MGAT2Q10469 447 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 FOXD4Q12950 439 aaPredicted RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 HNRNPA0Q13151 305 aaKnown RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 CYP27C1Q4G0S4 372 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 TRMT12Q53H54 448 aaKnown RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 CCDC92Q53HC0 331 aaPredicted RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 C1QL3Q5VWW1 255 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 LIPKQ5VXJ0 399 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SMARCD3Q6STE5 483 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 FAM131AQ6UXB0 335 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 RTL4Q6ZR62 310 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 VRK2Q86Y07 508 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 FAM109AQ8N4B1 249 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 FAM83FQ8NEG4 500 aaPredicted RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 OR7G1Q8NGA0 311 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 OR5M9Q8NGP3 310 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 OR6F1Q8NGZ6 308 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 FANK1Q8TC84 345 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SLC9A6Q92581 669 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 CDS1Q92903 461 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 RIT1Q92963 219 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 MVB12AQ96EY5 273 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 C16orf58Q96GQ5 468 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SENP5Q96HI0 755 aaPredicted RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 FAM46AQ96IP4 442 aaKnown RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 TAAR6Q96RI8 345 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 GPA33Q99795 319 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 WDR77Q9BQA1 342 aaPredicted RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 PLA2G12AQ9BZM1 189 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 MIXL1Q9H2W2 232 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SLA2Q9H6Q3 261 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 NIPAL2Q9H841 368 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 EXOSC3Q9NQT5 275 aaKnown RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 INIPQ9NRY2 104 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 SNTG1Q9NSN8 517 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 RBFOX1Q9NWB1 397 aaKnown RBP4.32□□□□□ -1.72
EDEM3-203ENST00000439962 MAT2BQ9NZL9 334 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ABRACLQ9P1F3 81 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 TINAGQ9UJW2 476 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 ICAM5Q9UMF0 924 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 DTX4Q9Y2E6 619 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 A0A0B4J2E0 115 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 A0A1B0GX12 115 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 A0A1W2PQL4 384 aaPredicted RBP4.31□□□□□ -1.72
EDEM3-203ENST00000439962 CPSF4LA6NMK7 179 aaKnown RBP4.31□□□□□ -1.72
EDEM3-203ENST00000439962 RIIAD1A6NNX1 92 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 FAM25AB3EWG3 89 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 FAM25CB3EWG5 89 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 FAM25GB3EWG6 89 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 GABRPO00591 440 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 CTDSP2O14595 271 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 ARPC3O15145 178 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 RNF13O43567 381 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 SC5DO75845 299 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 OPN1LWP04000 364 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 SAGP10523 405 aaPredicted RBP4.31□□□□□ -1.72
EDEM3-203ENST00000439962 PEPDP12955 493 aa4.31□□□□□ -1.72
EDEM3-203ENST00000439962 TBXA2RP21731 343 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms