RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 BTN2A1Q7KYR7 527 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 ABHD13Q7L211 337 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZNF546Q86UE3 836 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 CHST4Q8NCG5 386 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 OR51D1Q8NGF3 324 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 THAP3Q8WTV1 239 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 THEM6Q8WUY1 208 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 TSEN15Q8WW01 171 aaKnown RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 KIAA1143Q96AT1 154 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 SLC25A36Q96CQ1 311 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 RASD2Q96D21 266 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZFYVE21Q9BQ24 234 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 JAM3Q9BX67 310 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 C1QTNF2Q9BXJ5 285 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 KCND3Q9UK17 655 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 SLC6A5Q9Y345 797 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 AHCTF1Q8WYP5 2266 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 CACNA1EQ15878 2313 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 MDC1Q14676 2089 aaKnown RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 C5orf51A6NDU8 294 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 OR5K3A6NET4 321 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 EPOPA6NHQ4 379 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 TRIM3O75382 744 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZIC2O95409 532 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 PLGP00747 810 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 HMGN1P05114 100 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 CT62P0C5K7 136 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 EPXP11678 715 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 MYF5P13349 255 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZNF28P17035 718 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 FGF9P31371 208 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 EPHA4P54764 986 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 SEC61A1P61619 476 aaKnown RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 BTG1P62324 171 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 BTG2P78543 158 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 EIF2B1Q14232 305 aaKnown RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 PRAMEF17Q5VTA0 474 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 MEPCEQ7L2J0 689 aaKnown RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 GPAT4Q86UL3 456 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 MFSD9Q8NBP5 474 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 OR10R2Q8NGX6 335 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 NRSN2Q9GZP1 204 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 HRH4Q9H3N8 390 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 GPN1Q9HCN4 374 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 SPTBN5Q9NRC6 3674 aaKnown RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 CTNSO60931 367 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 MAOAP21397 527 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 H2BFSP57053 126 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 RPS15AP62244 130 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 FOXK2Q01167 660 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 AADACL4Q5VUY2 407 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZNF620Q6ZNG0 422 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 SLC35D2Q76EJ3 337 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 TMEM200AQ86VY9 491 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 ADGRG3Q86Y34 549 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 BEST3Q8N1M1 668 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZNF676Q8N7Q3 588 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 PHOSPHO1Q8TCT1 267 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 PTP4A1Q93096 173 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 TGM7Q96PF1 710 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 SPSB2Q99619 263 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 TIMM29Q9BSF4 260 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 MEPEQ9NQ76 525 aaPredicted RBP9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 COL4A4P53420 1690 aaPredicted RBP9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 DCDC2BA2VCK2 349 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 FITM1A5D6W6 292 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 TRAPPC13A5PLN9 417 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 MCRIP1C9JLW8 97 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 K7EQS6 105 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 UBL3O95164 117 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 S100A6P06703 90 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 SULT1A3P0DMM9 295 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 SULT1A4P0DMN0 295 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 HTR1FP30939 366 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 TMEM201Q5SNT2 666 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 WDR88Q6ZMY6 472 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 SEMA6DQ8NFY4 1073 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 OR10AC1Q8NH08 325 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZNF563Q8TA94 476 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 THAP6Q8TBB0 222 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 SLC37A2Q8TED4 501 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 PPP1R14AQ96A00 147 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 GAL3ST3Q96A11 431 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 S100A16Q96FQ6 103 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 HS6ST2Q96MM7 605 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 SLC6A7Q99884 636 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 MENTQ9BUN1 341 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 DAPP1Q9UN19 280 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 DOCK8Q8NF50 2099 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 NCOR1O75376 2440 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 TMEM72A0PK05 275 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 C11orf98E9PRG8 122 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 F5H5P2 479 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 F13BP05160 661 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 PI3P19957 117 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 GMFBP60983 142 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 PITPNAQ00169 270 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 HHEXQ03014 270 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 CBFBQ13951 182 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZNF658BQ4V348 819 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms