RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 BORAQ6PGQ7 559 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 MBOAT2Q6ZWT7 520 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 KIAA1958Q8N8K9 716 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 ASB12Q8WXK4 309 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 SORCS2Q96PQ0 1159 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 C19orf53Q9UNZ5 99 aaPredicted RBP11.11□□□□□ -0.63
NEK1-201ENST00000439128 TRBV4-1A0A0J9YWV2 114 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 TUSC2O75896 110 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 GLCEO94923 617 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 FTH1P19P0C7X4 201 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 DEFA4P12838 97 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 PRKAR1BP31321 381 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 WNT4P56705 351 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 CBLL1Q75N03 491 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 TSPYL5Q86VY4 417 aaPredicted RBP11.11□□□□□ -0.63
NEK1-201ENST00000439128 OR13C9Q8NGT0 318 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 TMEM163Q8TC26 289 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 GTF2H4Q92759 462 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 FGF11Q92914 225 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 SPACA9Q96E40 222 aaPredicted RBP11.11□□□□□ -0.63
NEK1-201ENST00000439128 TECTBQ96PL2 329 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 WWTR1Q9GZV5 400 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 DUSP15Q9H1R2 295 aaPredicted RBP11.11□□□□□ -0.63
NEK1-201ENST00000439128 MEIS3P1A6NDR6 274 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 LGALS8O00214 317 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 QDPRP09417 244 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 CDK2P24941 298 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 PRSS3P35030 304 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 HSF1Q00613 529 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 RIPPLY1Q0D2K3 151 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 CLN3Q13286 438 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 FXNQ16595 210 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 MPEG1Q2M385 716 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 COX20Q5RI15 118 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 TBPL2Q6SJ96 375 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 BATF2Q8N1L9 274 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 OR2V1Q8NHB1 315 aa11.11□□□□□ -0.63
NEK1-201ENST00000439128 S100A6P06703 90 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 SP9P0CG40 484 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 FABP6P51161 128 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 CD83Q01151 205 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 TEKQ02763 1124 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 OTUD1Q5VV17 481 aaPredicted RBP11.1□□□□□ -0.63
NEK1-201ENST00000439128 PXKQ7Z7A4 578 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 SLC43A2Q8N370 569 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 NEURL3Q96EH8 262 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 RNF170Q96K19 258 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 GDF15Q99988 308 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 MOKQ9UQ07 419 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 P2RY10O00398 339 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 CHRNB1P11230 501 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 EIF2S3P41091 472 aaKnown RBP11.1□□□□□ -0.63
NEK1-201ENST00000439128 ID4P47928 161 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 GPR157Q5UAW9 335 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 PRAMEF9Q5VWM5 478 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 NLRP8Q86W28 1048 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 SGPP2Q8IWX5 399 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 OR8H3Q8N146 312 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 SLC39A7Q92504 469 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 TREM1Q9NP99 234 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 PIGLQ9Y2B2 252 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 TIMM10BQ9Y5J6 103 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 ZNF182P17025 639 aaPredicted RBP11.1□□□□□ -0.63
NEK1-201ENST00000439128 TMPRSS3P57727 454 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 ACER2Q5QJU3 275 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 ACBD4Q8NC06 268 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 SDSLQ96GA7 329 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 OR11A1Q9GZK7 315 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 TMEM9Q9P0T7 183 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 COA3Q9Y2R0 106 aaPredicted RBP11.1□□□□□ -0.63
NEK1-201ENST00000439128 H3BSA7 217 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 EFSO43281 561 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 KCNK2O95069 426 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 MT-CO2P00403 227 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 POU2F2P09086 479 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 TSPAN31Q12999 210 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 FBXW12Q6X9E4 464 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 GDF7Q7Z4P5 450 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 PIGTQ969N2 578 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 PRR14Q9BWN1 585 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 OR2S2Q9NQN1 319 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 HIF1ANQ9NWT6 349 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 HSPE1-MOB4S4R3N1 261 aa11.1□□□□□ -0.63
NEK1-201ENST00000439128 SPINT2O43291 252 aa11.09□□□□□ -0.63
NEK1-201ENST00000439128 PRKYO43930 277 aa11.09□□□□□ -0.63
NEK1-201ENST00000439128 S100A9P06702 114 aaKnown RBP11.09□□□□□ -0.63
NEK1-201ENST00000439128 CCL4P13236 92 aa11.09□□□□□ -0.63
NEK1-201ENST00000439128 TMEM215Q68D42 235 aa11.09□□□□□ -0.63
NEK1-201ENST00000439128 RGS7BPQ6MZT1 257 aaPredicted RBP11.09□□□□□ -0.63
NEK1-201ENST00000439128 SP7Q8TDD2 431 aaPredicted RBP11.09□□□□□ -0.63
NEK1-201ENST00000439128 ZFP90Q8TF47 636 aa11.09□□□□□ -0.63
NEK1-201ENST00000439128 OCSTAMPQ9BR26 566 aa11.09□□□□□ -0.63
NEK1-201ENST00000439128 UBTD1Q9HAC8 227 aa11.09□□□□□ -0.63
NEK1-201ENST00000439128 ZNF286AQ9HBT8 521 aa11.09□□□□□ -0.63
NEK1-201ENST00000439128 S100A7P31151 101 aa11.09□□□□□ -0.63
NEK1-201ENST00000439128 CX3CR1P49238 355 aa11.09□□□□□ -0.63
NEK1-201ENST00000439128 SOX8P57073 446 aa11.09□□□□□ -0.63
NEK1-201ENST00000439128 SELPLGQ14242 412 aa11.09□□□□□ -0.63
NEK1-201ENST00000439128 TCTN1Q2MV58 587 aa11.09□□□□□ -0.63
NEK1-201ENST00000439128 PCGF3Q3KNV8 242 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms