RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 THBS4P35443 961 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 NR4A2P43354 598 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 NCALDP61601 193 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 LSM11P83369 360 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC01006-204ENST00000435354 SELPLGQ14242 412 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 GGTLC2Q14390 218 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 MFSD13AQ14CX5 517 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 RUNDC3AQ59EK9 446 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 CARD17Q5XLA6 110 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 MDP1Q86V88 176 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 RETREG3Q86VR2 466 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 UEVLDQ8IX04 471 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 SCAIQ8N9R8 606 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 SMYD1Q8NB12 490 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 GPR32P1Q8NGA4 272 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 RNF217Q8TC41 542 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 TXNDC15Q96J42 360 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 FOXN4Q96NZ1 517 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 KCNK17Q96T54 332 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 TMEM43Q9BTV4 400 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 EMC6Q9BV81 110 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 ZNF385DQ9H6B1 395 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 ZNF442Q9H7R0 627 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 TMEM27Q9HBJ8 222 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 NOX3Q9HBY0 568 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 TMEM160Q9NX00 188 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 MED29Q9NX70 200 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 CDC42EP3Q9UKI2 254 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 ANGPT4Q9Y264 503 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 IGHV4-61A0A0C4DH41 118 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 LOC390937A0A1W2PQ73 354 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 TMEM129A0AVI4 362 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 SLC35F4A4IF30 521 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 M0R3H8 397 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 NDUFS8O00217 210 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 AKAP8O43823 692 aaKnown RBP12.43□□□□□ -0.42
LINC01006-204ENST00000435354 SERPINB7O75635 380 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 IFNA2P01563 188 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 HLA-HP01893 362 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 IGFBP1P08833 259 aaPredicted RBP12.43□□□□□ -0.42
LINC01006-204ENST00000435354 NQO1P15559 274 aaKnown RBP12.43□□□□□ -0.42
LINC01006-204ENST00000435354 ARR3P36575 388 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 PPOXP50336 477 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 POU3F1Q03052 451 aaPredicted RBP12.43□□□□□ -0.42
LINC01006-204ENST00000435354 NPRL3Q12980 569 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 PMS2P3Q13401 168 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 NPTX1Q15818 432 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 DUSP7Q16829 419 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 SWT1Q5T5J6 900 aaKnown RBP12.43□□□□□ -0.42
LINC01006-204ENST00000435354 WDR88Q6ZMY6 472 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 RANBP3LQ86VV4 465 aaPredicted RBP12.43□□□□□ -0.42
LINC01006-204ENST00000435354 ARIH2OSQ8N7S6 290 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 C11orf65Q8NCR3 313 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 BHLHE22Q8NFJ8 381 aaPredicted RBP12.43□□□□□ -0.42
LINC01006-204ENST00000435354 DYDC1Q8WWB3 177 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 STON2Q8WXE9 905 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 THOC1Q96FV9 657 aaKnown RBP12.43□□□□□ -0.42
LINC01006-204ENST00000435354 LRR1Q96L50 414 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 ANKRD27Q96NW4 1050 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 EPYCQ99645 322 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 DOK1Q99704 481 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 ARHGDIGQ99819 225 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 PIMREGQ9BSJ6 248 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 ASPNQ9BXN1 380 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 B3GNT2Q9NY97 397 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 MRPL39Q9NYK5 338 aaKnown RBP12.43□□□□□ -0.42
LINC01006-204ENST00000435354 SELENONQ9NZV5 590 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 LEF1Q9UJU2 399 aaPredicted RBP12.43□□□□□ -0.42
LINC01006-204ENST00000435354 SLC13A4Q9UKG4 626 aa12.43□□□□□ -0.42
LINC01006-204ENST00000435354 RNF212BA8MTL3 300 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 hCG_2039718K7EN88 272 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 PLPP3O14495 311 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 LYPD3O95274 346 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 OPN1SWP03999 348 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 NPR2P20594 1047 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 MTPNP58546 118 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 PUDPQ08623 228 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 CARTPTQ16568 116 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 CYP51A1Q16850 503 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 LINC00114Q6XXX2 140 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 ZNF627Q7L945 461 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 DHDDSQ86SQ9 333 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 TSPYL5Q86VY4 417 aaPredicted RBP12.42□□□□□ -0.42
LINC01006-204ENST00000435354 CCDC36Q8IYA8 594 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 ZCCHC24Q8N2G6 241 aaKnown RBP12.42□□□□□ -0.42
LINC01006-204ENST00000435354 SVOPLQ8N434 492 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 DPP10Q8N608 796 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 OR4D11Q8NGI4 311 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 OR6T1Q8NGN1 323 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 MS4A3Q96HJ5 214 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 ZNF75AQ96N20 296 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 CGREF1Q99674 301 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 MCHR1Q99705 422 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 RABEP2Q9H5N1 569 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 EVA1AQ9H8M9 152 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 MYOZ1Q9NP98 299 aaPredicted RBP12.42□□□□□ -0.42
LINC01006-204ENST00000435354 ZNF224Q9NZL3 707 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 USP22Q9UPT9 525 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 NOX1Q9Y5S8 564 aa12.42□□□□□ -0.42
LINC01006-204ENST00000435354 FMO6PO60774 539 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms