RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 IGKV1-8A0A0C4DH67 115 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 A0A1W2PPV9 198 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 PQLC2LA1A4F0 135 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 EEF1E1-BLOC1S5C9J1V9 151 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 CTNSO60931 367 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 AMY2AP04746 511 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 SLC35G4P0C7Q5 338 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 ATXN8OSP0DMR3 200 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 PRSS3P35030 304 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 TRA2BP62995 288 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 EIPR1Q53HC9 387 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 LY6G6FQ5SQ64 297 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 PRAMEF17Q5VTA0 474 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 OTPQ5XKR4 325 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 RPL13AP3Q6NVV1 102 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 ZNF627Q7L945 461 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 RNF113BQ8IZP6 322 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 INO80EQ8NBZ0 244 aaPredicted RBP10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 ZPLD1Q8TCW7 415 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 CASTOR1Q8WTX7 329 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 RGP1Q92546 391 aaPredicted RBP10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 TCEAL3Q969E4 200 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 LGR4Q9BXB1 951 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 ATG5Q9H1Y0 275 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 EPHX3Q9H6B9 360 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 ZDHHC4Q9NPG8 344 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 GSN-AS1Q9NRJ2 163 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 ZFP57Q9NU63 452 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 FAM96BQ9Y3D0 163 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 SCN2AQ99250 2005 aa10.57□□□□□ -0.72
HMGCS1-202ENST00000433297 BCL2L11O43521 198 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 OR2T1O43869 369 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 OLFM2O95897 454 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 EPCAMP16422 314 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 CD34P28906 385 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 MNDAP41218 407 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 ILF3Q12906 894 aaKnown RBP eCLIP10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 TCTN1Q2MV58 587 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 ARHGAP11AQ6P4F7 1023 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 C17orf99Q6UX52 265 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 RHOUQ7L0Q8 258 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 KCTD9Q7L273 389 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 DEFB128Q7Z7B8 93 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 SYS1Q8N2H4 156 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 UTP23Q9BRU9 249 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 GAREM1Q9H706 876 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 TRAV8-7A0A075B6U6 113 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 C13orf42A0A1B0GVH6 325 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 TMEM72A0PK05 275 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 C4orf47A7E2U8 309 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 WASH3PC4AMC7 463 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 MCIDASD6RGH6 385 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 AGPAT2O15120 278 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 TXNL1O43396 289 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 RAB3DO95716 219 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 PCCBP05166 539 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 EEF1A1P68104 462 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 ARHGAP40Q5TG30 622 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 C11orf87Q6NUJ2 197 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 UNQ9370/PRO34162Q6UXP9 181 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 ZNF600Q6ZNG1 722 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 TMPRSS11FQ6ZWK6 438 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 OR2L13Q8N349 312 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 KCNRGQ8N5I3 272 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 ZNF676Q8N7Q3 588 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 OR5AK2Q8NH90 309 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 SP7Q8TDD2 431 aaPredicted RBP10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 CCDC107Q8WV48 283 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 ADAD1Q96M93 576 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 CNTNAP3BQ96NU0 1288 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 TCF20Q9UGU0 1960 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 GXYLT2A0PJZ3 443 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 TSPAN11A1L157 253 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 XRCC3O43542 346 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 GPRIN2O60269 458 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 NDUFS6O75380 124 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 SNAPINO95295 136 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 HLA-AP01891 365 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 LRG1P02750 347 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 H2AFB1P0C5Y9 115 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 CALCBP10092 127 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 VASPP50552 380 aaPredicted RBP10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 PRDX1Q06830 199 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 FAM122BQ7Z309 247 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 CD163Q86VB7 1156 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 ZNF227Q86WZ6 799 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 COX18Q8N8Q8 333 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 OR10AC1Q8NH08 325 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 ZCCHC10Q8TBK6 192 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 RASD2Q96D21 266 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 ZNF514Q96K75 400 aaPredicted RBP10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 BCL2L14Q9BZR8 327 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 HRH4Q9H3N8 390 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 HAO2Q9NYQ3 351 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 TAS2R8Q9NYW2 309 aa10.56□□□□□ -0.72
HMGCS1-202ENST00000433297 C17orf113A0A1B0GUU1 675 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 GGT3PA6NGU5 568 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 TTLL8A6PVC2 850 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 HAAOP46952 286 aa10.55□□□□□ -0.72
HMGCS1-202ENST00000433297 MECP2P51608 486 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms