RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 MRGPREQ86SM8 312 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 OR5M8Q8NGP6 311 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 HMGB4Q8WW32 186 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 OIT3Q8WWZ8 545 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 TNFRSF14Q92956 283 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 PCED1AQ9H1Q7 454 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 ATG5Q9H1Y0 275 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 OR2AG1Q9H205 316 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 HRH4Q9H3N8 390 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 GOLGA2P5Q9HBQ8 144 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 CHST11Q9NPF2 352 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 TRPC4Q9UBN4 977 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 KLK11Q9UBX7 282 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 MTCL1Q9Y4B5 1905 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 C1orf226A1L170 272 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 M0R036 132 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 ACOT7O00154 380 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 SIAH2O43255 324 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 UCHL1P09936 223 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 SNRPBP14678 240 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 ATF1P18846 271 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 NME2P22392 152 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 TACR1P25103 407 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 CD82P27701 267 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 CD1CP29017 333 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 MAXP61244 160 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 CACNG1Q06432 222 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 FZD5Q13467 585 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 ODF4Q2M2E3 257 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 C1orf185Q5T7R7 199 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 SLC22A25Q6T423 547 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 CMTM4Q8IZR5 234 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 OR4D9Q8NGE8 314 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 OR1J2Q8NGS2 313 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 OR4L1Q8NH43 312 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 CCDC107Q8WV48 283 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 PPCDCQ96CD2 204 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 ECHDC3Q96DC8 303 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 CNN2Q99439 309 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 HIST1H2BLQ99880 126 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 URM1Q9BTM9 101 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 EXO5Q9H790 373 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 NT5MQ9NPB1 228 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 GPR173Q9NS66 373 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 MRPS23Q9Y3D9 190 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 TRPM7Q96QT4 1865 aa8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 TDRD15B5MCY1 1934 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-206ENST00000429440 TEX13DA0A0J9YY54 714 aaPredicted RBP8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 SMIM35A0A1B0GVV1 85 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 TMEM238C9JI98 176 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 C9JQL5 133 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 CCL22O00626 93 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 TCF21O43680 179 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 KDELR3O43731 214 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 CA11O75493 328 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 CPSF4O95639 269 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 ARG1P05089 322 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 MELTFP08582 738 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 EPCAMP16422 314 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 ELAVL4P26378 380 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 FBXO47Q5MNV8 452 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 ZNF697Q5TEC3 545 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 MRM1Q6IN84 353 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 ZNF620Q6ZNG0 422 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 DNM1P46Q6ZS02 220 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 ESPNLQ6ZVH7 1005 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 PAQR9Q6ZVX9 377 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 TAF8Q7Z7C8 310 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 PAQR4Q8N4S7 273 aaPredicted RBP8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 IQCF1Q8N6M8 205 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 LINC01599Q8WXQ3 324 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 NDRG1Q92597 394 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 TAAR8Q969N4 342 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 NTNG2Q96CW9 530 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 SLC25A38Q96DW6 304 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 DTD2Q96FN9 168 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 ADGRE3Q9BY15 652 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 P2RY12Q9H244 342 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 TMEM38AQ9H6F2 299 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 OSER1Q9NX31 292 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 KLK14Q9P0G3 267 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 RPH3ALQ9UNE2 315 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 A0A087WZY1 265 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 TRBC2A0A5B9 178 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 FAM227AF5H4B4 570 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 FFAR1O14842 300 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 XRCC3O43542 346 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 SYT7O43581 403 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 TSPAN3O60637 253 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 AIFM1O95831 613 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 APODP05090 189 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 CD46P15529 392 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 ADORA2BP29275 332 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 TTPAP49638 278 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 SMIM11AP58511 58 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 UBE2MP61081 183 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 SCARB2Q14108 478 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 FAM110CQ1W6H9 321 aa8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 ZNF791Q3KP31 576 aaPredicted RBP8.13□□□□□ -1.11
CDC42BPA-206ENST00000429440 BEX5Q5H9J7 111 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms