RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 UBE2MP61081 183 aaKnown RBP7.61□□□□□ -1.19
CD44-208ENST00000428726 HNRNPKP61978 463 aaKnown RBP eCLIP7.61□□□□□ -1.19
CD44-208ENST00000428726 OC90Q02509 493 aaPredicted RBP7.61□□□□□ -1.19
CD44-208ENST00000428726 FHL1Q13642 323 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 PON3Q15166 354 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 ZMYND11Q15326 602 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 ALG10Q5BKT4 473 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 ZNF574Q6ZN55 896 aaPredicted RBP7.61□□□□□ -1.19
CD44-208ENST00000428726 ELMOD2Q8IZ81 293 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 TRMT10AQ8TBZ6 339 aaKnown RBP7.61□□□□□ -1.19
CD44-208ENST00000428726 TCTN2Q96GX1 697 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 SPACA5Q96QH8 159 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 REPIN1Q9BWE0 567 aaKnown RBP7.61□□□□□ -1.19
CD44-208ENST00000428726 ERVMER34-1Q9H9K5 563 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 NOX4Q9NPH5 578 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 CENPMQ9NSP4 180 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 KCNG2Q9UJ96 466 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 A0A1W2PNR3 127 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 A0A1W2PR77 199 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 FAM172BPA6NC97 362 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 POLR1CO15160 346 aaPredicted RBP7.6□□□□□ -1.19
CD44-208ENST00000428726 CHP2O43745 196 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 SPARCP09486 303 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 GAAP10253 952 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 UBL4AP11441 157 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 MAP2K3P46734 347 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 GDI2P50395 445 aaKnown RBP7.6□□□□□ -1.19
CD44-208ENST00000428726 AGFG1P52594 562 aaKnown RBP7.6□□□□□ -1.19
CD44-208ENST00000428726 SLC37A1P57057 533 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 DGCR2P98153 550 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 RPL18Q07020 188 aaKnown RBP7.6□□□□□ -1.19
CD44-208ENST00000428726 BIKQ13323 160 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 C14orf28Q4W4Y0 310 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 LCN1P1Q5VSP4 162 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 OR7E24Q6IFN5 339 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 PWWP2BQ6NUJ5 590 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 ZNF613Q6PF04 617 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 ULK3Q6PHR2 472 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 TMPRSS11FQ6ZWK6 438 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 OR6V1Q8N148 313 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 ZNF615Q8N8J6 731 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 C17orf50Q8WW18 174 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 RNF170Q96K19 258 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 ZNF304Q9HCX3 659 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 CMC2Q9NRP2 79 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 NUDT15Q9NV35 164 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 OCIAD1Q9NX40 245 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 SLC35A3Q9Y2D2 325 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 PCDHGB2Q9Y5G2 931 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 FABP7O15540 132 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 IGLV3-19P01714 112 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 HRGP04196 525 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 YES1P07947 543 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 FOSL2P15408 326 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 SPI1P17947 270 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 ATF1P18846 271 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 FBLP22087 321 aaKnown RBP7.6□□□□□ -1.19
CD44-208ENST00000428726 CXCR1P25024 350 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 RPS18P62269 152 aaKnown RBP7.6□□□□□ -1.19
CD44-208ENST00000428726 POU4F3Q15319 338 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 GARNL3Q5VVW2 1013 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 JAZF1Q86VZ6 243 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 SLC35F2Q8IXU6 374 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 SLC38A6Q8IZM9 456 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 FAM181AQ8N9Y4 354 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 STT3BQ8TCJ2 826 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 HOXB13Q92826 284 aaPredicted RBP7.6□□□□□ -1.19
CD44-208ENST00000428726 HLA-CQ95604 372 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 ALG12Q9BV10 488 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 IGHV3-15A0A0B4J1V0 119 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 LOC101059948A0A1B0GTJ6 334 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 LYRM1O43325 122 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 LMX1BO60663 402 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 SLC16A7O60669 478 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 PTP4A3O75365 173 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 AKR7A3O95154 331 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 ZFPL1O95159 310 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 NDUFB2O95178 105 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 MT-ND5P03915 603 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 GUSBP08236 651 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 LIPCP11150 499 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 CCL4P13236 92 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 SLC6A6P31641 620 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 RFC3P40938 356 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 CXCL12P48061 93 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 SKP1P63208 163 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 BDH1Q02338 343 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 FAPQ12884 760 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 XKRXQ6PP77 449 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 FAM219AQ8IW50 185 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 ACBD4Q8NC06 268 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 OMA1Q96E52 524 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 CDX2Q99626 313 aaPredicted RBP7.6□□□□□ -1.19
CD44-208ENST00000428726 TRIM36Q9NQ86 728 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 LANCL2Q9NS86 450 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.6□□□□□ -1.19
CD44-208ENST00000428726 GRHPRQ9UBQ7 328 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 KLK11Q9UBX7 282 aa7.6□□□□□ -1.19
CD44-208ENST00000428726 ELF5Q9UKW6 265 aaPredicted RBP7.6□□□□□ -1.19
CD44-208ENST00000428726 EML5Q05BV3 1969 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms