RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 ADORA3P0DMS8 318 aa16.08■□□□□ 0.16
GPC1-205ENST00000427506 HOXB1P14653 301 aaPredicted RBP16.08■□□□□ 0.16
GPC1-205ENST00000427506 ERICH5Q6P6B1 374 aa16.08■□□□□ 0.16
GPC1-205ENST00000427506 LINC00114Q6XXX2 140 aa16.08■□□□□ 0.16
GPC1-205ENST00000427506 CALHM3Q86XJ0 350 aa16.08■□□□□ 0.16
GPC1-205ENST00000427506 TMEM123Q8N131 208 aa16.08■□□□□ 0.16
GPC1-205ENST00000427506 OR5J2Q8NH18 312 aa16.08■□□□□ 0.16
GPC1-205ENST00000427506 CCDC134Q9H6E4 229 aa16.08■□□□□ 0.16
GPC1-205ENST00000427506 MOV10Q9HCE1 1003 aaKnown RBP16.08■□□□□ 0.16
GPC1-205ENST00000427506 B3GAT2Q9NPZ5 323 aa16.08■□□□□ 0.16
GPC1-205ENST00000427506 MED29Q9NX70 200 aa16.08■□□□□ 0.16
GPC1-205ENST00000427506 BAG5Q9UL15 447 aa16.08■□□□□ 0.16
GPC1-205ENST00000427506 NF1P21359 2839 aa16.08■□□□□ 0.16
GPC1-205ENST00000427506 SLC35F4A4IF30 521 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 RNF223E7ERA6 249 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 C11orf98E9PRG8 122 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 KPNA4O00629 521 aaPredicted RBP16.07■□□□□ 0.16
GPC1-205ENST00000427506 SSX4O60224 188 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 CH25HO95992 272 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 IFNA14P01570 189 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 CRYAAP02489 173 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 BMP4P12644 408 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 APOBEC3AP31941 199 aaPredicted RBP16.07■□□□□ 0.16
GPC1-205ENST00000427506 CAPZA2P47755 286 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 NUDT6P53370 316 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 CHRNB3Q05901 458 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 RAB35Q15286 201 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 C11orf71Q6IPW1 123 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 WDR88Q6ZMY6 472 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 PXKQ7Z7A4 578 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 CARM1Q86X55 608 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 OR6N1Q8NGY5 312 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 C10orf82Q8WW14 230 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 ZNF837Q96EG3 531 aaPredicted RBP16.07■□□□□ 0.16
GPC1-205ENST00000427506 TXNDC15Q96J42 360 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 MPP4Q96JB8 637 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 NELFAQ9H3P2 528 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 ARMCX1Q9P291 453 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 USP22Q9UPT9 525 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 CADP27708 2225 aa16.07■□□□□ 0.16
GPC1-205ENST00000427506 SEC14L2O76054 403 aa16.06■□□□□ 0.16
GPC1-205ENST00000427506 THY1P04216 161 aa16.06■□□□□ 0.16
GPC1-205ENST00000427506 HIST1H2ABP04908 130 aa16.06■□□□□ 0.16
GPC1-205ENST00000427506 UMPSP11172 480 aa16.06■□□□□ 0.16
GPC1-205ENST00000427506 MDH1P40925 334 aaKnown RBP16.06■□□□□ 0.16
GPC1-205ENST00000427506 CRYBA2P53672 197 aa16.06■□□□□ 0.16
GPC1-205ENST00000427506 CAMK2DQ13557 499 aa16.06■□□□□ 0.16
GPC1-205ENST00000427506 PHYHD1Q5SRE7 291 aa16.06■□□□□ 0.16
GPC1-205ENST00000427506 HIST3H2AQ7L7L0 130 aa16.06■□□□□ 0.16
GPC1-205ENST00000427506 C20orf196Q8IYI0 205 aa16.06■□□□□ 0.16
GPC1-205ENST00000427506 MAPK1IP1LQ8NDC0 245 aa16.06■□□□□ 0.16
GPC1-205ENST00000427506 HIST1H2ACQ93077 130 aa16.06■□□□□ 0.16
GPC1-205ENST00000427506 ZNF583Q96ND8 569 aa16.06■□□□□ 0.16
GPC1-205ENST00000427506 KATNB1Q9BVA0 655 aa16.06■□□□□ 0.16
GPC1-205ENST00000427506 PCDHAC1Q9H158 963 aa16.06■□□□□ 0.16
GPC1-205ENST00000427506 NANSQ9NR45 359 aa16.06■□□□□ 0.16
GPC1-205ENST00000427506 PMF1-BGLAPU3KQ54 211 aa16.06■□□□□ 0.16
GPC1-205ENST00000427506 ZNF99A8MXY4 864 aaPredicted RBP16.05■□□□□ 0.16
GPC1-205ENST00000427506 SLC22A2O15244 555 aa16.05■□□□□ 0.16
GPC1-205ENST00000427506 LYPD3O95274 346 aa16.05■□□□□ 0.16
GPC1-205ENST00000427506 TNFRSF1BP20333 461 aa16.05■□□□□ 0.16
GPC1-205ENST00000427506 TAS2R41P59536 307 aa16.05■□□□□ 0.16
GPC1-205ENST00000427506 ZNF74Q16587 644 aa16.05■□□□□ 0.16
GPC1-205ENST00000427506 LRRC23Q53EV4 343 aaPredicted RBP16.05■□□□□ 0.16
GPC1-205ENST00000427506 DEF8Q6ZN54 512 aa16.05■□□□□ 0.16
GPC1-205ENST00000427506 TSPYL5Q86VY4 417 aaPredicted RBP16.05■□□□□ 0.16
GPC1-205ENST00000427506 POU5F2Q8N7G0 328 aa16.05■□□□□ 0.16
GPC1-205ENST00000427506 HTRA1Q92743 480 aa16.05■□□□□ 0.16
GPC1-205ENST00000427506 RCN3Q96D15 328 aa16.05■□□□□ 0.16
GPC1-205ENST00000427506 FBXO17Q96EF6 278 aa16.05■□□□□ 0.16
GPC1-205ENST00000427506 LRR1Q96L50 414 aa16.05■□□□□ 0.16
GPC1-205ENST00000427506 RHNO1Q9BSD3 238 aa16.05■□□□□ 0.16
GPC1-205ENST00000427506 REG4Q9BYZ8 158 aa16.05■□□□□ 0.16
GPC1-205ENST00000427506 ULBP2Q9BZM5 246 aa16.05■□□□□ 0.16
GPC1-205ENST00000427506 POFUT2Q9Y2G5 429 aa16.05■□□□□ 0.16
GPC1-205ENST00000427506 FAM220BPB1ANY3 271 aa16.04■□□□□ 0.16
GPC1-205ENST00000427506 RNF13O43567 381 aa16.04■□□□□ 0.16
GPC1-205ENST00000427506 SHOX2O60902 331 aaPredicted RBP16.04■□□□□ 0.16
GPC1-205ENST00000427506 CECR9P0C854 216 aa16.04■□□□□ 0.16
GPC1-205ENST00000427506 IFNGR1P15260 489 aa16.04■□□□□ 0.16
GPC1-205ENST00000427506 CBR1P16152 277 aa16.04■□□□□ 0.16
GPC1-205ENST00000427506 BIDP55957 195 aa16.04■□□□□ 0.16
GPC1-205ENST00000427506 NAAAQ02083 359 aa16.04■□□□□ 0.16
GPC1-205ENST00000427506 NPRL3Q12980 569 aa16.04■□□□□ 0.16
GPC1-205ENST00000427506 C3orf36Q3SXR2 165 aa16.04■□□□□ 0.16
GPC1-205ENST00000427506 VHLLQ6RSH7 139 aa16.04■□□□□ 0.16
GPC1-205ENST00000427506 CCDC36Q8IYA8 594 aa16.04■□□□□ 0.16
GPC1-205ENST00000427506 OR2T12Q8NG77 320 aa16.04■□□□□ 0.16
GPC1-205ENST00000427506 RP9Q8TA86 221 aaKnown RBP16.04■□□□□ 0.16
GPC1-205ENST00000427506 SLC19A3Q9BZV2 496 aa16.04■□□□□ 0.16
GPC1-205ENST00000427506 CRNNQ9UBG3 495 aaPredicted RBP16.04■□□□□ 0.16
GPC1-205ENST00000427506 ZNF229Q9UJW7 825 aa16.04■□□□□ 0.16
GPC1-205ENST00000427506 ZFHX3Q15911 3703 aa16.04■□□□□ 0.16
GPC1-205ENST00000427506 ELOVL7A1L3X0 281 aa16.03■□□□□ 0.16
GPC1-205ENST00000427506 H7C417 338 aa16.03■□□□□ 0.16
GPC1-205ENST00000427506 CCDC22O60826 627 aa16.03■□□□□ 0.16
GPC1-205ENST00000427506 CD79AP11912 226 aa16.03■□□□□ 0.16
GPC1-205ENST00000427506 PCSK6P29122 969 aa16.03■□□□□ 0.16
GPC1-205ENST00000427506 KDELR2P33947 212 aa16.03■□□□□ 0.16
GPC1-205ENST00000427506 ARR3P36575 388 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms