RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 LURAP1LQ8IV03 231 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 NKAIN4Q8IVV8 208 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 PGAM4Q8N0Y7 254 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 DEPDC4Q8N2C3 294 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 CCDC197Q8NCU1 140 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 TMEM255BQ8WV15 326 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 AKAP1Q92667 903 aaKnown RBP eCLIP9.61□□□□□ -0.87
USP49-204ENST00000423567 SGTBQ96EQ0 304 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 RADILQ96JH8 1075 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 HSH2DQ96JZ2 352 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 ADAD1Q96M93 576 aaKnown RBP9.61□□□□□ -0.87
USP49-204ENST00000423567 OR2M2Q96R28 347 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 PIP5K1AQ99755 562 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 PRSS27Q9BQR3 290 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 TMEM204Q9BSN7 226 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 ZNF426Q9BUY5 554 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 FNDC11Q9BVV2 318 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 OBP2BQ9NPH6 170 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 SLC17A5Q9NRA2 495 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 SAMD4AQ9UPU9 718 aaKnown RBP9.61□□□□□ -0.87
USP49-204ENST00000423567 MGAT4BQ9UQ53 548 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 SLC25A15Q9Y619 301 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 PDZD2O15018 2839 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 CCDC168Q8NDH2 2452 aa9.61□□□□□ -0.87
USP49-204ENST00000423567 ABCA4P78363 2273 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 SLC35F4A4IF30 521 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 HTR3EA5X5Y0 456 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 DPRXA6NFQ7 191 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 BLOC1S5-TXNDC5H3BN57 136 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 M0R1B8 84 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 M0R3G1 203 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 ABCD4O14678 606 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 FAM107AO95990 144 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 PLAUP00749 431 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 IGF2P01344 180 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 HLA-DOBP13765 273 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 NCK1P16333 377 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 CD53P19397 219 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 FUT1P19526 365 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 ROR2Q01974 943 aaKnown RBP9.6□□□□□ -0.87
USP49-204ENST00000423567 KRT72Q14CN4 511 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 TESK1Q15569 626 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 TBRG1Q3YBR2 411 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 CARD17Q5XLA6 110 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 ADAM5Q6NVV9 412 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 ANKRD16Q6P6B7 361 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 TSPYL5Q86VY4 417 aaPredicted RBP9.6□□□□□ -0.87
USP49-204ENST00000423567 RNF148Q8N7C7 305 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 ZNF611Q8N823 705 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 OR1K1Q8NGR3 316 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 OR6N1Q8NGY5 312 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 TMEM171Q8WVE6 324 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 FBXW5Q969U6 566 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 CXXC4Q9H2H0 198 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 CXorf56Q9H5V9 222 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 MOV10Q9HCE1 1003 aaKnown RBP9.6□□□□□ -0.87
USP49-204ENST00000423567 ARL8BQ9NVJ2 186 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 FAIMQ9NVQ4 179 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 MED29Q9NX70 200 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 NPAP1Q9NZP6 1156 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 EGFL7Q9UHF1 273 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 MAGEL2Q9UJ55 1249 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 POU2F3Q9UKI9 436 aa9.6□□□□□ -0.87
USP49-204ENST00000423567 FAM32AQ9Y421 112 aaKnown RBP9.6□□□□□ -0.87
USP49-204ENST00000423567 A0A1W2PRG6 482 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 RPL36A-HNRNPH2H7BZ11 118 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 ARHGEF9O43307 516 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 TMCC2O75069 709 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 OR7A10O76100 309 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 ASAH2BP0C7U1 165 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 HSD17B1P14061 328 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 IFNGR1P15260 489 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 TCN1P20061 433 aaPredicted RBP9.59□□□□□ -0.87
USP49-204ENST00000423567 CD40P25942 277 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 YAP1P46937 504 aaKnown RBP9.59□□□□□ -0.87
USP49-204ENST00000423567 CSNK1A1P48729 337 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 UGT2B15P54855 530 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 CDH11P55287 796 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 BIDP55957 195 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 SLC25A3Q00325 362 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 LGALS3BPQ08380 585 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 ZP4Q12836 540 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 TRAM2Q15035 370 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 CEACAM16Q2WEN9 425 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 SPATS1Q496A3 300 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 HIKESHIQ53FT3 197 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 SLC22A25Q6T423 547 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 SEZ6L2Q6UXD5 910 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 SLC35D2Q76EJ3 337 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 RRM2BQ7LG56 351 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 HDDC2Q7Z4H3 204 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 CCDC36Q8IYA8 594 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 C20orf196Q8IYI0 205 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 CDK20Q8IZL9 346 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 DEFB107AQ8IZN7 70 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 OFCC1Q8IZS5 231 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 TMEM123Q8N131 208 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 WDR31Q8NA23 367 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 KBTBD8Q8NFY9 601 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 PFN4Q8NHR9 129 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms