RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 C8BP07358 591 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 GTF2E2P29084 291 aaKnown RBP9.59□□□□□ -0.87
SSBP3-206ENST00000420121 PCGF2P35227 344 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 NUDT6P53370 316 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 HGFACQ04756 655 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 NFYCQ13952 458 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 CYP51A1Q16850 503 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 METTL21CQ5VZV1 264 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 NANOGP8Q6NSW7 305 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 HMBOX1Q6NT76 420 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 ZNF613Q6PF04 617 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 CALHM3Q86XJ0 350 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 C20orf196Q8IYI0 205 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 FAM169BQ8N8A8 192 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 OR10A6Q8NH74 314 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 NANOS1Q8WY41 292 aaKnown RBP9.59□□□□□ -0.87
SSBP3-206ENST00000420121 TXNDC15Q96J42 360 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 ADAD1Q96M93 576 aaKnown RBP9.59□□□□□ -0.87
SSBP3-206ENST00000420121 ZNF75AQ96N20 296 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 MCHR1Q99705 422 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 SIKE1Q9BRV8 207 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 ZNF426Q9BUY5 554 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 EMC6Q9BV81 110 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 KATNB1Q9BVA0 655 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 TMEM120AQ9BXJ8 343 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 NANOGQ9H9S0 305 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 NOX3Q9HBY0 568 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 CRLF2Q9HC73 371 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 MED29Q9NX70 200 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 B3GNT2Q9NY97 397 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 MRPL39Q9NYK5 338 aaKnown RBP9.59□□□□□ -0.87
SSBP3-206ENST00000420121 PLA2G2EQ9NZK7 142 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 TRIM33Q9UPN9 1127 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 CORINQ9Y5Q5 1042 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 RTTNQ86VV8 2226 aa9.59□□□□□ -0.87
SSBP3-206ENST00000420121 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.58□□□□□ -0.882e-8■■■■□ 24
SSBP3-206ENST00000420121 SLC35F4A4IF30 521 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 ZNF99A8MXY4 864 aaPredicted RBP9.58□□□□□ -0.88
SSBP3-206ENST00000420121 PLPP3O14495 311 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 CHP2O43745 196 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 CD5LO43866 347 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 CRLF1O75462 422 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 CBR1P16152 277 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 UBE2NP61088 152 aaKnown RBP9.58□□□□□ -0.88
SSBP3-206ENST00000420121 NCALDP61601 193 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 POU3F1Q03052 451 aaPredicted RBP9.58□□□□□ -0.88
SSBP3-206ENST00000420121 PUDPQ08623 228 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 C1DQ13901 141 aaKnown RBP9.58□□□□□ -0.88
SSBP3-206ENST00000420121 MFSD13AQ14CX5 517 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 ADIPOQQ15848 244 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 TRMT5Q32P41 509 aaKnown RBP9.58□□□□□ -0.88
SSBP3-206ENST00000420121 RABL3Q5HYI8 236 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 ENTPD8Q5MY95 495 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 CCDC80Q76M96 950 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 ZNF627Q7L945 461 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 RANBP3LQ86VV4 465 aaPredicted RBP9.58□□□□□ -0.88
SSBP3-206ENST00000420121 UEVLDQ8IX04 471 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 GPR137CQ8N3F9 429 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 PIK3C3Q8NEB9 887 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 ADAMTS16Q8TE57 1224 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 C10orf105Q8TEF2 133 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 KCTD12Q96CX2 325 aaKnown RBP9.58□□□□□ -0.88
SSBP3-206ENST00000420121 FBXO17Q96EF6 278 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 SORCS2Q96PQ0 1159 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 EPYCQ99645 322 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 PRSS27Q9BQR3 290 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 RHNO1Q9BSD3 238 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 PCDHAC1Q9H158 963 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 CA10Q9NS85 328 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 ARGLU1Q9NWB6 273 aaPredicted RBP9.58□□□□□ -0.88
SSBP3-206ENST00000420121 ZNF446Q9NWS9 450 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 ZNF224Q9NZL3 707 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 USP22Q9UPT9 525 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 SVEP1Q4LDE5 3571 aa9.58□□□□□ -0.88
SSBP3-206ENST00000420121 IGHV2OR16-5A0A0B4J2B6 119 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 CPSF4LA6NMK7 179 aaKnown RBP9.57□□□□□ -0.88
SSBP3-206ENST00000420121 VWC2LB2RUY7 222 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 M0R3G1 203 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 CRYAAP02489 173 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 IGFBP1P08833 259 aaPredicted RBP9.57□□□□□ -0.88
SSBP3-206ENST00000420121 NQO1P15559 274 aaKnown RBP9.57□□□□□ -0.88
SSBP3-206ENST00000420121 PAX7P23759 505 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 EFNA4P52798 201 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 PPP2R2BQ00005 443 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 LOXL1Q08397 574 aaPredicted RBP9.57□□□□□ -0.88
SSBP3-206ENST00000420121 KLF10Q13118 480 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 PMS2P3Q13401 168 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 RAB35Q15286 201 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 ZNF74Q16587 644 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 VMACQ2NL98 169 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 CARD17Q5XLA6 110 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 PXKQ7Z7A4 578 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 PATL1Q86TB9 770 aaKnown RBP9.57□□□□□ -0.88
SSBP3-206ENST00000420121 SLC30A8Q8IWU4 369 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 LRRC17Q8N6Y2 441 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 OR5J2Q8NH18 312 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 VANGL1Q8TAA9 524 aaPredicted RBP9.57□□□□□ -0.88
SSBP3-206ENST00000420121 RNF217Q8TC41 542 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 LRR1Q96L50 414 aa9.57□□□□□ -0.88
SSBP3-206ENST00000420121 MDFIQ99750 246 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms