RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 RNF122Q9H9V4 155 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 GRHPRQ9UBQ7 328 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 IL20RAQ9UHF4 553 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 TLN1Q9Y490 2541 aaKnown RBP12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 A0A1W2PRG6 482 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 OR14I1A6ND48 311 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 EFCAB10A6NFE3 127 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 FAM166BA8MTA8 275 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 ENTPD6O75354 484 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 RPSAP08865 295 aaKnown RBP12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 CELA3AP09093 270 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 HIST1H1CP16403 213 aaKnown RBP12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 PAICSP22234 425 aaKnown RBP12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 SLC2A5P22732 501 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 HTR1FP30939 366 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 CENPAP49450 140 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 SUCLG1P53597 346 aaKnown RBP12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 CLDN20P56880 219 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 APOFQ13790 326 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 ACKR1Q16570 336 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 SLC35D3Q5M8T2 416 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 HBMQ6B0K9 141 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 MEIOBQ8N635 442 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 TMEM99Q8N816 258 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 ATP6V1C2Q8NEY4 427 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 FNDC8Q8TC99 324 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 ADAD1Q96M93 576 aaKnown RBP12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 TSPAN32Q96QS1 320 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 UCN2Q96RP3 112 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 IL4I1Q96RQ9 567 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 JAM3Q9BX67 310 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 PRDM14Q9GZV8 571 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 TSPAN10Q9H1Z9 355 aaPredicted RBP12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 TMEM185BQ9H7F4 350 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 GP6Q9HCN6 339 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 HINT3Q9NQE9 182 aaKnown RBP12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 VSX1Q9NZR4 365 aaPredicted RBP12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 KLHL13Q9P2N7 655 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 SEC14L4Q9UDX3 406 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZNF346Q9UL40 294 aaKnown RBP12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 ADAM18Q9Y3Q7 739 aa12.75□□□□□ -0.37
SHMT1P1-201ENST00000419974 SPTA1P02549 2419 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 IGKV3D-15A0A087WSY6 115 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 A0A087WXM4 84 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 SLC22A31A6NKX4 558 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 PRR23D1E9PI22 279 aaPredicted RBP12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 TNFSF11O14788 317 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 TFECO14948 347 aaPredicted RBP12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 AKR7A3O95154 331 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 F13BP05160 661 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 FAM87AP0C7U9 286 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 PRR23D2P0DMB1 279 aaPredicted RBP12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 ENPP1P22413 925 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 RPS3AP61247 264 aaKnown RBP12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 ERVK-25P63136 954 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 HSF1Q00613 529 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 RAB40BQ12829 278 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 GGTLC2Q14390 218 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 SLC17A1Q14916 467 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 ABLIM2Q6H8Q1 611 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 NIPAL3Q6P499 406 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 MEPCEQ7L2J0 689 aaKnown RBP12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 PRSS48Q7RTY5 328 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 EGFL6Q8IUX8 553 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 SLC37A3Q8NCC5 494 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 BPIFB6Q8NFQ5 453 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 OR6X1Q8NH79 312 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 OR10D3Q8NH80 312 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 TAAR6Q96RI8 345 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 TIMP4Q99727 224 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 MRPL13Q9BYD1 178 aaKnown RBP12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 SLC25A18Q9H1K4 315 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 WARS2Q9UGM6 360 aaKnown RBP12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 MOKQ9UQ07 419 aa12.74□□□□□ -0.37
SHMT1P1-201ENST00000419974 TNRC6AQ8NDV7 1962 aaKnown RBP12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 SPENQ96T58 3664 aaKnown RBP12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 TEX13CA0A0J9YWL9 993 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 J3QKU1 62 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 K7EM74 188 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 EIF1AYO14602 144 aaKnown RBP12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 SMAD9O15198 467 aaKnown RBP12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 TRAF3IP2O43734 574 aaPredicted RBP12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 CYTIPO60759 359 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 SLC2A10O95528 541 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 DBTP11182 482 aaKnown RBP12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 AHCYP23526 432 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 RFC3P40938 356 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 CDKN2AP42771 156 aaKnown RBP12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 KRR1Q13601 381 aaKnown RBP12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 CRMP1Q14194 572 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 SMN1Q16637 294 aaKnown RBP12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 PLEKHN1Q494U1 663 aaPredicted RBP12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 KLHL22Q53GT1 634 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 KRTCAP3Q53RY4 240 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 MESTQ5EB52 335 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZNF324BQ6AW86 544 aaPredicted RBP12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 TMEM225Q6GV28 225 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZNF773Q6PK81 442 aa12.73□□□□□ -0.37
SHMT1P1-201ENST00000419974 SLC35D2Q76EJ3 337 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms