RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 GID8Q9NWU2 228 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 CRNNQ9UBG3 495 aaPredicted RBP17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 GDF2Q9UK05 429 aaPredicted RBP17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 MOKQ9UQ07 419 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 TLN2Q9Y4G6 2542 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 ATP6V1G2-DDX39BF2Z307 99 aa17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 SLC22A2O15244 555 aa17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 APOBEC3AP31941 199 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 ACVR1BP36896 505 aa17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 POU3F1Q03052 451 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 ERICH5Q6P6B1 374 aa17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 TTC33Q6PID6 262 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 DNM1P46Q6ZS02 220 aa17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 PXKQ7Z7A4 578 aa17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 TSPYL5Q86VY4 417 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 C20orf196Q8IYI0 205 aa17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 MPP4Q96JB8 637 aa17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 LRR1Q96L50 414 aa17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 ZNF583Q96ND8 569 aa17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 KATNB1Q9BVA0 655 aa17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 CACNG6Q9BXT2 260 aa17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 SLC7A7Q9UM01 511 aa17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 CSPG4Q6UVK1 2322 aa17.1■□□□□ 0.33
TSPAN4-209ENST00000409543 NAV3Q8IVL0 2385 aa17.09■□□□□ 0.33
TSPAN4-209ENST00000409543 CEACAM16Q2WEN9 425 aa17.09■□□□□ 0.33
TSPAN4-209ENST00000409543 PHYHD1Q5SRE7 291 aa17.09■□□□□ 0.33
TSPAN4-209ENST00000409543 OR5J2Q8NH18 312 aa17.09■□□□□ 0.33
TSPAN4-209ENST00000409543 C10orf82Q8WW14 230 aa17.09■□□□□ 0.33
TSPAN4-209ENST00000409543 PROX1Q92786 737 aa17.09■□□□□ 0.33
TSPAN4-209ENST00000409543 ZNF837Q96EG3 531 aaPredicted RBP17.09■□□□□ 0.33
TSPAN4-209ENST00000409543 TXNDC15Q96J42 360 aa17.09■□□□□ 0.33
TSPAN4-209ENST00000409543 ZNF426Q9BUY5 554 aa17.09■□□□□ 0.33
TSPAN4-209ENST00000409543 EMC6Q9BV81 110 aa17.09■□□□□ 0.33
TSPAN4-209ENST00000409543 SLC19A3Q9BZV2 496 aa17.09■□□□□ 0.33
TSPAN4-209ENST00000409543 BAG5Q9UL15 447 aa17.09■□□□□ 0.33
TSPAN4-209ENST00000409543 CAPN7Q9Y6W3 813 aa17.09■□□□□ 0.33
TSPAN4-209ENST00000409543 ALPK2Q86TB3 2170 aa17.08■□□□□ 0.33
TSPAN4-209ENST00000409543 SLC35F4A4IF30 521 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 ZNF99A8MXY4 864 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 M0R3G1 203 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 IFNA14P01570 189 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 IGLV1-44P01699 117 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 CRYAAP02489 173 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 AHCYP23526 432 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 MDH1P40925 334 aaKnown RBP17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 TUBA1BP68363 451 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 TUBA4AP68366 448 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 CHRNB3Q05901 458 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 ZNF74Q16587 644 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 CARD17Q5XLA6 110 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 TUBA1AQ71U36 451 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 CCDC36Q8IYA8 594 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 KCNS3Q9BQ31 491 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 MED29Q9NX70 200 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 USP22Q9UPT9 525 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 SH3GLB1Q9Y371 365 aa17.08■□□□□ 0.32
TSPAN4-209ENST00000409543 FN1P02751 2386 aaKnown RBP17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 ZNF726A6NNF4 738 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 RNF223E7ERA6 249 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 H7C417 338 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 OR6A2O95222 327 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 CH25HO95992 272 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 IGKV3-15P01624 115 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 ADORA3P0DMS8 318 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 BMP4P12644 408 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 CBR1P16152 277 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 ZP4Q12836 540 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 RAB35Q15286 201 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 CARM1Q86X55 608 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 PRSS27Q9BQR3 290 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 REG4Q9BYZ8 158 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 B3GAT2Q9NPZ5 323 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 ARMCX1Q9P291 453 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 ZNF229Q9UJW7 825 aa17.07■□□□□ 0.32
TSPAN4-209ENST00000409543 FAM220BPB1ANY3 271 aa17.06■□□□□ 0.32
TSPAN4-209ENST00000409543 SSX4O60224 188 aa17.06■□□□□ 0.32
TSPAN4-209ENST00000409543 CECR9P0C854 216 aa17.06■□□□□ 0.32
TSPAN4-209ENST00000409543 NAAAQ02083 359 aa17.06■□□□□ 0.32
TSPAN4-209ENST00000409543 CAMK2DQ13557 499 aa17.06■□□□□ 0.32
TSPAN4-209ENST00000409543 RP9Q8TA86 221 aaKnown RBP17.06■□□□□ 0.32
TSPAN4-209ENST00000409543 POLR2J2Q9GZM3 115 aaKnown RBP17.06■□□□□ 0.32
TSPAN4-209ENST00000409543 POLR2J3Q9H1A7 115 aaKnown RBP17.06■□□□□ 0.32
TSPAN4-209ENST00000409543 NANSQ9NR45 359 aa17.06■□□□□ 0.32
TSPAN4-209ENST00000409543 TAS2R5Q9NYW4 299 aa17.06■□□□□ 0.32
TSPAN4-209ENST00000409543 PMF1-BGLAPU3KQ54 211 aa17.06■□□□□ 0.32
TSPAN4-209ENST00000409543 HIVEP2P31629 2446 aa17.06■□□□□ 0.32
TSPAN4-209ENST00000409543 C11orf98E9PRG8 122 aa17.05■□□□□ 0.32
TSPAN4-209ENST00000409543 KPNA4O00629 521 aaPredicted RBP17.05■□□□□ 0.32
TSPAN4-209ENST00000409543 HIST1H2ABP04908 130 aa17.05■□□□□ 0.32
TSPAN4-209ENST00000409543 IFNGR1P15260 489 aa17.05■□□□□ 0.32
TSPAN4-209ENST00000409543 KDELR2P33947 212 aa17.05■□□□□ 0.32
TSPAN4-209ENST00000409543 ARR3P36575 388 aa17.05■□□□□ 0.32
TSPAN4-209ENST00000409543 NUDT6P53370 316 aa17.05■□□□□ 0.32
TSPAN4-209ENST00000409543 SWI5Q1ZZU3 235 aa17.05■□□□□ 0.32
TSPAN4-209ENST00000409543 MST1LQ2TV78 715 aa17.05■□□□□ 0.32
TSPAN4-209ENST00000409543 HIST3H2AQ7L7L0 130 aa17.05■□□□□ 0.32
TSPAN4-209ENST00000409543 ZNF627Q7L945 461 aa17.05■□□□□ 0.32
TSPAN4-209ENST00000409543 WDFY1Q8IWB7 410 aa17.05■□□□□ 0.32
TSPAN4-209ENST00000409543 LRRC17Q8N6Y2 441 aa17.05■□□□□ 0.32
TSPAN4-209ENST00000409543 OR2T12Q8NG77 320 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms