RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 S100GP29377 79 aa8.28□□□□□ -1.08
LIG4-202ENST00000405925 HTR5AP47898 357 aa8.28□□□□□ -1.08
LIG4-202ENST00000405925 SUMO3P55854 103 aaPredicted RBP8.28□□□□□ -1.08
LIG4-202ENST00000405925 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.28□□□□□ -1.08
LIG4-202ENST00000405925 CTU2Q2VPK5 515 aaKnown RBP8.28□□□□□ -1.08
LIG4-202ENST00000405925 LRRN1Q6UXK5 716 aa8.28□□□□□ -1.08
LIG4-202ENST00000405925 ARIH2OSQ8N7S6 290 aa8.28□□□□□ -1.08
LIG4-202ENST00000405925 TMEM99Q8N816 258 aa8.28□□□□□ -1.08
LIG4-202ENST00000405925 TEAD3Q99594 435 aa8.28□□□□□ -1.08
LIG4-202ENST00000405925 NAA50Q9GZZ1 169 aaKnown RBP8.28□□□□□ -1.08
LIG4-202ENST00000405925 SMURF1Q9HCE7 757 aa8.28□□□□□ -1.08
LIG4-202ENST00000405925 ENAMQ9NRM1 1142 aa8.28□□□□□ -1.08
LIG4-202ENST00000405925 PTPRDP23468 1912 aa8.27□□□□□ -1.08
LIG4-202ENST00000405925 TSC2P49815 1807 aa8.27□□□□□ -1.08
LIG4-202ENST00000405925 A0A0B4J2E0 115 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 A0A1B0GX12 115 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 ZNF891A8MT65 544 aaPredicted RBP8.27□□□□□ -1.09
LIG4-202ENST00000405925 FAM25EA8MYX2 175 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 H3BMQ9 156 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 VAMP5O95183 116 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 RPS27P42677 84 aaKnown RBP8.27□□□□□ -1.09
LIG4-202ENST00000405925 EIF2B2P49770 351 aaKnown RBP8.27□□□□□ -1.09
LIG4-202ENST00000405925 RAB25P57735 213 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 MLLT11Q13015 90 aaPredicted RBP8.27□□□□□ -1.09
LIG4-202ENST00000405925 MOGQ16653 247 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 MEP1BQ16820 701 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 NKAPLQ5M9Q1 402 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 HES5Q5TA89 166 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 GDPGP1Q6ZNW5 385 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 DGAT2L6Q6ZPD8 337 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 BEST3Q8N1M1 668 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 TOMM5Q8N4H5 51 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 TNFAIP8L1Q8WVP5 186 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 COG8Q96MW5 612 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 WACQ9BTA9 647 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 GABARAPL3Q9BY60 117 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 FBXO8Q9NRD0 319 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 KLHL9Q9P2J3 617 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 CLEC2DQ9UHP7 191 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 ZNF222Q9UK12 451 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 ZNF346Q9UL40 294 aaKnown RBP8.27□□□□□ -1.09
LIG4-202ENST00000405925 ING4Q9UNL4 249 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 ANKUB1A6NFN9 424 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 METTL15A6NJ78 407 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 SELENOFO60613 162 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 ZNF806P0C7X5 589 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 SDHAP31040 664 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 STARP49675 285 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 SNU13P55769 128 aaKnown RBP8.27□□□□□ -1.09
LIG4-202ENST00000405925 SNRPGP62308 76 aaKnown RBP8.27□□□□□ -1.09
LIG4-202ENST00000405925 SCRN3Q0VDG4 424 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 CD226Q15762 336 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 TMEM244Q5VVB8 128 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 OTPQ5XKR4 325 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 C8orf82Q6P1X6 216 aaPredicted RBP8.27□□□□□ -1.09
LIG4-202ENST00000405925 SLC43A2Q8N370 569 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 OR11G2Q8NGC1 345 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 OR52I1Q8NGK6 324 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 NDNFQ8TB73 568 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 CPT1CQ8TCG5 803 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 KTI12Q96EK9 354 aaPredicted RBP8.27□□□□□ -1.09
LIG4-202ENST00000405925 GPR87Q9BY21 358 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 ENPP5Q9UJA9 477 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 B3GALT5Q9Y2C3 310 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 PLXNA3P51805 1871 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 NLRC5Q86WI3 1866 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 TRAV17A0A0B4J275 112 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 LOC102725191A0A1B0GVB3 256 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 PRAMEF27A3QJZ7 478 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 DLGAP1O14490 977 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 DOK2O60496 412 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 GLCEO94923 617 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 GSTT2BP0CG30 244 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 CT45A8P0DMV1 189 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 CT45A9P0DMV2 189 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 TMEM225BP0DP42 221 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 PSKH1P11801 424 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 HOXA6P31267 233 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 CLDN15P56746 228 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 GNG2P59768 71 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 PCBD1P61457 104 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 PRKCDQ05655 676 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 CT45A2Q5DJT8 189 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 SLC25A25Q6KCM7 469 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 MAML2Q8IZL2 1156 aaPredicted RBP8.27□□□□□ -1.09
LIG4-202ENST00000405925 FAM26EQ8N5C1 309 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 HAVCR2Q8TDQ0 301 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 PLA2G12AQ9BZM1 189 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 ATG5Q9H1Y0 275 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 WDR76Q9H967 626 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 C20orf141Q9NUB4 165 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 DIMT1Q9UNQ2 313 aaKnown RBP8.27□□□□□ -1.09
LIG4-202ENST00000405925 TMEM184BQ9Y519 407 aaPredicted RBP8.27□□□□□ -1.09
LIG4-202ENST00000405925 CCDC88CQ9P219 2028 aa8.27□□□□□ -1.09
LIG4-202ENST00000405925 THADAQ6YHU6 1953 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 C21orf140B9A014 251 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 CAPNS1P04632 268 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 UCHL1P09936 223 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 SBK2P0C263 348 aa8.26□□□□□ -1.09
LIG4-202ENST00000405925 TGFBR2P37173 567 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms