RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 TTC33Q6PID6 262 aaPredicted RBP12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 WDR88Q6ZMY6 472 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 CCDC36Q8IYA8 594 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 FBXL14Q8N1E6 418 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 MUC15Q8N387 334 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 C10orf53Q8N6V4 93 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 RP9Q8TA86 221 aaKnown RBP12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 SLC38A2Q96QD8 506 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 CRLF2Q9HC73 371 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 GPR35Q9HC97 309 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 SLC7A7Q9UM01 511 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 AP3M1Q9Y2T2 418 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 CSPG4Q6UVK1 2322 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 IGHV1-18A0A0C4DH31 117 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 CCDC22O60826 627 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 IGHV4-39P01824 125 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 HLA-DOBP13765 273 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 PTNP21246 168 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 FABP6P51161 128 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 ARF1P84077 181 aaKnown RBP12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 ZNF74Q16587 644 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 CLEC12BQ2HXU8 276 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 CEACAM16Q2WEN9 425 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 DNM1P46Q6ZS02 220 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 ARPINQ7Z6K5 226 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 CARM1Q86X55 608 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 C20orf196Q8IYI0 205 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 POM121Q96HA1 1249 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 HS6ST2Q96MM7 605 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 KATNB1Q9BVA0 655 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 ARMCX1Q9P291 453 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 ZNF229Q9UJW7 825 aa12.97□□□□□ -0.33
SMIM11A-203ENST00000399299 HIVEP2P31629 2446 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 A0A096LPE4 126 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 A0A1W2PPZ6 126 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 SLC35F4A4IF30 521 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 ZNF99A8MXY4 864 aaPredicted RBP12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 ATP6V1G2-DDX39BF2Z307 99 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 OR5F1O95221 314 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 IGF2P01344 180 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 IGKV3-15P01624 115 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 IGLV1-44P01699 117 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 ADORA3P0DMS8 318 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 HOXB4P17483 251 aaPredicted RBP12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 APOBEC3AP31941 199 aaPredicted RBP12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 RBM34P42696 430 aaKnown RBP12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 ZP4Q12836 540 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 TNK1Q13470 666 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 ZNF627Q7L945 461 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 MICU2Q8IYU8 434 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 OR2T12Q8NG77 320 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 RCN3Q96D15 328 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 ADAD1Q96M93 576 aaKnown RBP12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 PRSS27Q9BQR3 290 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 EMC6Q9BV81 110 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 CACNG6Q9BXT2 260 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 B3GAT2Q9NPZ5 323 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 NANSQ9NR45 359 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 MED29Q9NX70 200 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 USP22Q9UPT9 525 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 MOKQ9UQ07 419 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 SH3GLB1Q9Y371 365 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 ATP23Q9Y6H3 246 aa12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 FN1P02751 2386 aaKnown RBP12.96□□□□□ -0.33
SMIM11A-203ENST00000399299 ELOVL7A1L3X0 281 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 ZNF726A6NNF4 738 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 H7C417 338 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 M0R3G1 203 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 SMAD7O15105 426 aaKnown RBP12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 NDUFS7O75251 213 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 OR6A2O95222 327 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 LY6G6DO95868 133 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 CH25HO95992 272 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 CRYAAP02489 173 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 ASAH2BP0C7U1 165 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 THRBP10828 461 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 COX4I1P13073 169 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 AHCYP23526 432 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 KDELR2P33947 212 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 CYBRD1Q53TN4 286 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 PHYHD1Q5SRE7 291 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 POU5F2Q8N7G0 328 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 ZNF837Q96EG3 531 aaPredicted RBP12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 TXNDC15Q96J42 360 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 KCNS3Q9BQ31 491 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 MEPEQ9NQ76 525 aaPredicted RBP12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 TAS2R5Q9NYW4 299 aa12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 GDF2Q9UK05 429 aaPredicted RBP12.95□□□□□ -0.34
SMIM11A-203ENST00000399299 ARFGEF3Q5TH69 2177 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 KPNA4O00629 521 aaPredicted RBP12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 MT-ND1P03886 318 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 CECR9P0C854 216 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 BMP4P12644 408 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 IFNGR1P15260 489 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 CBR1P16152 277 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 TNFRSF1BP20333 461 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 ACVR1BP36896 505 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 TAS2R41P59536 307 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 TUBA1BP68363 451 aa12.94□□□□□ -0.34
SMIM11A-203ENST00000399299 TUBA4AP68366 448 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms