RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 Q499Y3 187 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 BEX5Q5H9J7 111 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 LRRTM1Q86UE6 522 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 SDR16C5Q8N3Y7 309 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 OR6N1Q8NGY5 312 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 OR5AK2Q8NH90 309 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 MRPL48Q96GC5 212 aaKnown RBP12.76□□□□□ -0.37
APOB-202ENST00000399256 TSSK2Q96PF2 358 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 WDR13Q9H1Z4 485 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 TMEM185BQ9H7F4 350 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 APMAPQ9HDC9 416 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 KLHDC2Q9Y2U9 406 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 SLC6A5Q9Y345 797 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 ETV7Q9Y603 341 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 TMEM72A0PK05 275 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 RFPL4AA6NLU0 287 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 MPTX1A8MV57 137 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 RFPL4AL1F8VTS6 287 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 ABCD4O14678 606 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 P2RX6O15547 441 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 XRCC3O43542 346 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 BRINP1O60477 761 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 PAK4O96013 591 aaPredicted RBP12.76□□□□□ -0.37
APOB-202ENST00000399256 CD3DP04234 171 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 CSF1P09603 554 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 UBBP0CG47 229 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 UBCP0CG48 685 aaKnown RBP12.76□□□□□ -0.37
APOB-202ENST00000399256 RPS27AP62979 156 aaKnown RBP12.76□□□□□ -0.37
APOB-202ENST00000399256 UBA52P62987 128 aaKnown RBP12.76□□□□□ -0.37
APOB-202ENST00000399256 PABPC1L2AQ5JQF8 200 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 KRT77Q7Z794 578 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 SMARCD2Q92925 531 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 ZNF75AQ96N20 296 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 SLC6A17Q9H1V8 727 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 POFUT1Q9H488 388 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 RASL12Q9NYN1 266 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 SPTBP11277 2137 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 TRAV18A0A075B6X5 111 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 A0A1B0GW55 424 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 ZNF98A6NK75 572 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 DUX4L2P0CJ85 424 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 DUX4L3P0CJ86 424 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 DUX4L4P0CJ87 422 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 DUX4L5P0CJ88 424 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 DUX4L6P0CJ89 424 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 DUX4L7P0CJ90 424 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 MNDAP41218 407 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 LUMP51884 338 aaPredicted RBP12.75□□□□□ -0.37
APOB-202ENST00000399256 IRF4Q15306 451 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 TMEM88Q6PEY1 159 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 TMED4Q7Z7H5 227 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 CDRT4Q8N9R6 151 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 TMEM185AQ8NFB2 350 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 OR51D1Q8NGF3 324 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 OR10AC1Q8NH08 325 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 C15orf40Q8WUR7 153 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 FGF13Q92913 245 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 BARX1Q9HBU1 254 aaPredicted RBP12.75□□□□□ -0.37
APOB-202ENST00000399256 DUSP22Q9NRW4 184 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 DUX4Q9UBX2 424 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 ZNF337Q9Y3M9 751 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 A0A1B0GTQ1 180 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 OTOL1A6NHN0 477 aaPredicted RBP12.75□□□□□ -0.37
APOB-202ENST00000399256 FBXO45P0C2W1 286 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 CT62P0C5K7 136 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 MGMTP16455 207 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 CEBPBP17676 345 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 MAPK3P27361 379 aaPredicted RBP12.75□□□□□ -0.37
APOB-202ENST00000399256 ACAA2P42765 397 aaKnown RBP12.75□□□□□ -0.37
APOB-202ENST00000399256 LRRC37A5PQ49AS3 106 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 DNM1P46Q6ZS02 220 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 USP53Q70EK8 1073 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 GRASPQ7Z6J2 395 aaPredicted RBP12.75□□□□□ -0.37
APOB-202ENST00000399256 ZNF227Q86WZ6 799 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 RPS4Y2Q8TD47 263 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 ZNF426Q9BUY5 554 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 MRI1Q9BV20 369 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 TEX101Q9BY14 249 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 ULBP3Q9BZM4 244 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 RXFP3Q9NSD7 469 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 FRRS1LQ9P0K9 344 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 PURGQ9UJV8 347 aaKnown RBP12.75□□□□□ -0.37
APOB-202ENST00000399256 GGT3PA6NGU5 568 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 SIGLEC6O43699 453 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 FGF17O60258 216 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 ZNF254O75437 659 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 AKAIN1P0CW23 69 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 TLX1P31314 330 aaPredicted RBP12.75□□□□□ -0.37
APOB-202ENST00000399256 B2MP61769 119 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 PLPP4Q5VZY2 271 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 LEG1Q6P5S2 330 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 KIRREL2Q6UWL6 708 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 FAM220AQ7Z4H9 259 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 TMEM17Q86X19 198 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 TMEM52Q8NDY8 209 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 OR51A4Q8NGJ6 313 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 DAPP1Q9UN19 280 aa12.75□□□□□ -0.37
APOB-202ENST00000399256 MYO7AQ13402 2215 aa12.74□□□□□ -0.37
APOB-202ENST00000399256 GRXCR1A8MXD5 290 aa12.74□□□□□ -0.37
APOB-202ENST00000399256 C1QTNF3-AMACRE9PGA6 284 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms