RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 UBTD2Q8WUN7 234 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 THOC3Q96J01 351 aaKnown RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 POM121L2Q96KW2 1035 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 ATG101Q9BSB4 218 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 INPP5KQ9BT40 448 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 ARV1Q9H2C2 271 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 PLXNA4Q9HCM2 1894 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 ZFP64Q9NPA5 681 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 GPR83Q9NYM4 423 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 KCNE1BA0A087WTH5 132 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 CDIPTO14735 213 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 SIVA1O15304 175 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 SIAH2O43255 324 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 IFNA17P01571 189 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 EBLN1P0CF75 366 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 SPP1P10451 314 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 GABRA1P14867 456 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 STOMP27105 288 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 TIMP3P35625 211 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 IFNGR2P38484 337 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 GDNFP39905 211 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 EFNA3P52797 238 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 SNRPEP62304 92 aaKnown RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 AESQ08117 197 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 GPR17Q13304 367 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 PRICKLE4Q2TBC4 344 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 CES5AQ6NT32 575 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 RNF165Q6ZSG1 346 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 PRSS48Q7RTY5 328 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 TRIM46Q7Z4K8 759 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 ABI3BPQ7Z7G0 1075 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 SKA3Q8IX90 412 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 CFAP52Q8N1V2 620 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 CLEC1AQ8NC01 280 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 TMEM185AQ8NFB2 350 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 MDGA1Q8NFP4 955 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 NLGN4YQ8NFZ3 816 aaPredicted RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 DAZLQ92904 295 aaKnown RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 LRRC46Q96FV0 321 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 CMTM7Q96FZ5 175 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 HDHD5Q9BXW7 423 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 STRADBQ9C0K7 418 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 DCSTAMPQ9H295 470 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 NSUN3Q9H649 340 aaKnown RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 CLMPQ9H6B4 373 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 PDFQ9HBH1 243 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 ASIC5Q9NY37 505 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 KPTNQ9Y664 436 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 A0A0D9SEW6 157 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 PNMA8CA0A1B0GUJ8 204 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 EFCAB9A8MZ26 197 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 OR7A17O14581 309 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 RFXANKO14593 260 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 IMPA2O14732 288 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 RPN2P04844 631 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 FABP3P05413 133 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 PCMT1P22061 227 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 GJA4P35212 333 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 GZMKP49863 264 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 SRSF2Q01130 221 aaKnown RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 HMGCS1Q01581 520 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 PPP1R8Q12972 351 aaKnown RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 LYPLAL1Q5VWZ2 237 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 C1orf87Q8N0U7 546 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 NAT16Q8N8M0 369 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 HMGB4Q8WW32 186 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 LGALS12Q96DT0 336 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 ZBED6CLQ96FA7 236 aaPredicted RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 MS4A3Q96HJ5 214 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 CMSS1Q9BQ75 279 aaKnown RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 THAP7Q9BT49 309 aaPredicted RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 CIPCQ9C0C6 399 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 DUSP21Q9H596 190 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 ING4Q9UNL4 249 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 OARD1Q9Y530 152 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 OR51B4Q9Y5P0 310 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 MYO16Q9Y6X6 1858 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 FAM240BA0A1B0GVZ2 78 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 MANBAO00462 879 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 DUSP11O75319 330 aaKnown RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 STK16O75716 305 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 AP2A2O94973 939 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 CLDN9O95484 217 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 SYPP08247 313 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 PNMTP11086 282 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 BMP4P12644 408 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 HOXD9P28356 352 aaPredicted RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 SLC6A6P31641 620 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 SLC35A2P78381 396 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 PMPCAQ10713 525 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 RBMS2Q15434 407 aaKnown RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 NKG7Q16617 165 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 DPY19L1Q2PZI1 675 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 ADPRMQ3LIE5 342 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 PRAMEF7Q5VXH5 474 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 CPZQ66K79 652 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 DESI1Q6ICB0 168 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 ZNF529Q6P280 563 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 INO80CQ6PI98 192 aaPredicted RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 CXCL17Q6UXB2 119 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms