RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 LTBQ06643 244 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 HACD4Q5VWC8 232 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 RSBN1Q5VWQ0 802 aaPredicted RBP19.55■□□□□ 0.72
TRIM54-202ENST00000380075 OVCH1Q7RTY7 1134 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 ZNRF4Q8WWF5 429 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 TP53INP1Q96A56 240 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 B3GAT2Q9NPZ5 323 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 RPRD1BQ9NQG5 326 aaKnown RBP19.55■□□□□ 0.72
TRIM54-202ENST00000380075 ITGB1BP2Q9UKP3 347 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 HEATR5AQ86XA9 2040 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 TRAV36DV7A0A075B6V5 113 aa19.54■□□□□ 0.72
TRIM54-202ENST00000380075 CPNE3O75131 537 aaKnown RBP19.54■□□□□ 0.72
TRIM54-202ENST00000380075 TACSTD2P09758 323 aa19.54■□□□□ 0.72
TRIM54-202ENST00000380075 SDHBP21912 280 aa19.54■□□□□ 0.72
TRIM54-202ENST00000380075 RPL18Q07020 188 aaKnown RBP19.54■□□□□ 0.72
TRIM54-202ENST00000380075 CBFBQ13951 182 aa19.54■□□□□ 0.72
TRIM54-202ENST00000380075 TMEM71Q6P5X7 295 aa19.54■□□□□ 0.72
TRIM54-202ENST00000380075 PLET1Q6UQ28 207 aa19.54■□□□□ 0.72
TRIM54-202ENST00000380075 UNQ9370/PRO34162Q6UXP9 181 aa19.54■□□□□ 0.72
TRIM54-202ENST00000380075 OR6F1Q8NGZ6 308 aa19.54■□□□□ 0.72
TRIM54-202ENST00000380075 OR2T4Q8NH00 348 aa19.54■□□□□ 0.72
TRIM54-202ENST00000380075 KTI12Q96EK9 354 aaPredicted RBP19.54■□□□□ 0.72
TRIM54-202ENST00000380075 MMP28Q9H239 520 aa19.54■□□□□ 0.72
TRIM54-202ENST00000380075 ACOXLQ9NUZ1 547 aa19.54■□□□□ 0.72
TRIM54-202ENST00000380075 DLL3Q9NYJ7 618 aa19.54■□□□□ 0.72
TRIM54-202ENST00000380075 PCNX2A6NKB5 2137 aa19.54■□□□□ 0.72
TRIM54-202ENST00000380075 ZNF879B4DU55 563 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 LYRM1O43325 122 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 MT-ATP6P00846 226 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 ABCD3P28288 659 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 DDOSTP39656 456 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 KIR2DL3P43628 341 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 SQSTM1Q13501 440 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 KCNJ8Q15842 424 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 C1orf189Q5VU69 101 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 RHBDD2Q6NTF9 364 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 SAMD12Q8N8I0 201 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 TRMT10AQ8TBZ6 339 aaKnown RBP19.53■□□□□ 0.72
TRIM54-202ENST00000380075 NRSN2Q9GZP1 204 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 RENP00797 406 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 GP1BBP13224 206 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 ITPKBP27987 946 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 HOXD11P31277 338 aaPredicted RBP19.53■□□□□ 0.72
TRIM54-202ENST00000380075 PITPNBP48739 271 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 OR10A3P58181 314 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 RPS11P62280 158 aaKnown RBP eCLIP19.53■□□□□ 0.72
TRIM54-202ENST00000380075 ACY1Q03154 408 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 ZNF684Q5T5D7 378 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 PYHIN1Q6K0P9 492 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 MARCH3Q86UD3 253 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 TAAR8Q969N4 342 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 TTTY10Q9BZA0 68 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 TEKT2Q9UIF3 430 aa19.53■□□□□ 0.72
TRIM54-202ENST00000380075 TFECO14948 347 aaPredicted RBP19.52■□□□□ 0.72
TRIM54-202ENST00000380075 ATP6V1G1O75348 118 aa19.52■□□□□ 0.72
TRIM54-202ENST00000380075 BGLAPP02818 100 aa19.52■□□□□ 0.72
TRIM54-202ENST00000380075 GP1BAP07359 652 aa19.52■□□□□ 0.72
TRIM54-202ENST00000380075 P2RX1P51575 399 aa19.52■□□□□ 0.72
TRIM54-202ENST00000380075 FAM220AQ7Z4H9 259 aa19.52■□□□□ 0.72
TRIM54-202ENST00000380075 MISPQ8IVT2 679 aa19.52■□□□□ 0.72
TRIM54-202ENST00000380075 OR4M1Q8NGD0 313 aa19.52■□□□□ 0.72
TRIM54-202ENST00000380075 CMTM3Q96MX0 182 aa19.52■□□□□ 0.72
TRIM54-202ENST00000380075 NUDT22Q9BRQ3 303 aa19.52■□□□□ 0.72
TRIM54-202ENST00000380075 RTN4RQ9BZR6 473 aa19.52■□□□□ 0.72
TRIM54-202ENST00000380075 ASXL3Q9C0F0 2248 aa19.52■□□□□ 0.72
TRIM54-202ENST00000380075 IGLV3-12A0A075B6K2 115 aa19.52■□□□□ 0.71
TRIM54-202ENST00000380075 OR6C70A6NIJ9 312 aa19.52■□□□□ 0.71
TRIM54-202ENST00000380075 SLC25A12O75746 678 aa19.52■□□□□ 0.71
TRIM54-202ENST00000380075 SERPINI2O75830 405 aa19.52■□□□□ 0.71
TRIM54-202ENST00000380075 EIF4EP06730 217 aaKnown RBP19.52■□□□□ 0.71
TRIM54-202ENST00000380075 ANKRD34CP0C6C1 535 aa19.52■□□□□ 0.71
TRIM54-202ENST00000380075 CCL7P80098 99 aa19.52■□□□□ 0.71
TRIM54-202ENST00000380075 YIF1BQ5BJH7 314 aa19.52■□□□□ 0.71
TRIM54-202ENST00000380075 MAMDC2Q7Z304 686 aaPredicted RBP19.52■□□□□ 0.71
TRIM54-202ENST00000380075 PRSS58Q8IYP2 241 aa19.52■□□□□ 0.71
TRIM54-202ENST00000380075 GHDCQ8N2G8 530 aa19.52■□□□□ 0.71
TRIM54-202ENST00000380075 OR13C5Q8NGS8 318 aa19.52■□□□□ 0.71
TRIM54-202ENST00000380075 RABL2AQ9UBK7 228 aaPredicted RBP19.52■□□□□ 0.71
TRIM54-202ENST00000380075 RABL2BQ9UNT1 228 aa19.52■□□□□ 0.71
TRIM54-202ENST00000380075 ZNF281Q9Y2X9 895 aa19.52■□□□□ 0.71
TRIM54-202ENST00000380075 A0A0G2JMP0 313 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 A0A0X1KG70 313 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 CDC14CA4D256 554 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 FTH1P19P0C7X4 201 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 HLA-DMAP28067 261 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 NR4A2P43354 598 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 POLR2HP52434 150 aaKnown RBP19.51■□□□□ 0.71
TRIM54-202ENST00000380075 MADCAM1Q13477 382 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 HSD17B12Q53GQ0 312 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 C5orf46Q6UWT4 87 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 BAIAP2L2Q6UXY1 529 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 COX15Q7KZN9 410 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 OR4M2Q8NGB6 313 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 RFT1Q96AA3 541 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 ZNF524Q96C55 264 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 TSPAN32Q96QS1 320 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 SNX18Q96RF0 628 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 SLC7A5P2Q9GIP4 190 aa19.51■□□□□ 0.71
TRIM54-202ENST00000380075 FAM240BA0A1B0GVZ2 78 aa19.5■□□□□ 0.71
TRIM54-202ENST00000380075 A0A1W2PQM1 296 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms