RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 OR52B6Q8NGF0 335 aa10.9□□□□□ -0.67
NPHP4-202ENST00000378161 OR51G2Q8NGK0 314 aa10.9□□□□□ -0.67
NPHP4-202ENST00000378161 FUBP1Q96AE4 644 aaKnown RBP10.9□□□□□ -0.67
NPHP4-202ENST00000378161 CMTM7Q96FZ5 175 aa10.9□□□□□ -0.67
NPHP4-202ENST00000378161 NIPSNAP1Q9BPW8 284 aa10.9□□□□□ -0.67
NPHP4-202ENST00000378161 CHST5Q9GZS9 411 aa10.9□□□□□ -0.67
NPHP4-202ENST00000378161 TNFRSF12AQ9NP84 129 aa10.9□□□□□ -0.67
NPHP4-202ENST00000378161 SLCO1C1Q9NYB5 712 aa10.9□□□□□ -0.67
NPHP4-202ENST00000378161 A0A1W2PPE2 198 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 COLCA2A8K830 154 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 MTX2O75431 263 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 SBK3P0C264 359 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 MMP15P51511 669 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 GAB1Q13480 694 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 AWAT2Q6E213 333 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 TMEM205Q6UW68 189 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 SERPINA11Q86U17 422 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 IQCF1Q8N6M8 205 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 ACBD7Q8N6N7 88 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 EXD3Q8N9H8 876 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 OR51S1Q8NGJ8 323 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 OR52B4Q8NGK2 314 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 SPRYD4Q8WW59 207 aaPredicted RBP10.89□□□□□ -0.67
NPHP4-202ENST00000378161 OR51I1Q9H343 314 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 ZNF552Q9H707 407 aaPredicted RBP10.89□□□□□ -0.67
NPHP4-202ENST00000378161 MFNGO00587 321 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 GRM6O15303 877 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 NXPH2O95156 264 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 SOD1P00441 154 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 WNT1P04628 370 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 ANKRD34CP0C6C1 535 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 ELFN1P0C7U0 828 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 AKAIN1P0CW23 69 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 NRG3P56975 720 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 KLF3P57682 345 aaPredicted RBP10.89□□□□□ -0.67
NPHP4-202ENST00000378161 TAS2R19P59542 299 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 CDK5Q00535 292 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 VEZF1Q14119 521 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 ISXQ2M1V0 245 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 COMMD1Q8N668 190 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 OR52I1Q8NGK6 324 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 ZNF461Q8TAF7 563 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 USP3Q9Y6I4 520 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 LOXHD1Q8IVV2 1947 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 MASP2O00187 686 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 FAAHO00519 579 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 GCGP01275 180 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 HAGHQ16775 308 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 ZNF626Q68DY1 528 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 GTF2H5Q6ZYL4 71 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 THOC6Q86W42 341 aaKnown RBP10.89□□□□□ -0.67
NPHP4-202ENST00000378161 ARHGAP12Q8IWW6 846 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 LINC00471Q8N535 108 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 LMNTD1Q8N9Z9 388 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 GPR150Q8NGU9 434 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 GPR119Q8TDV5 335 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 XAGE5Q8WWM1 108 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 NIPSNAP3BQ9BS92 247 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 PLAC1Q9HBJ0 212 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 PITPNC1Q9UKF7 332 aa10.89□□□□□ -0.67
NPHP4-202ENST00000378161 OR2AG2A6NM03 316 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 B4GALT3O60512 393 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 PMS2P2O95744 297 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 CH25HO95992 272 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 EPHA1P21709 976 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 FGF9P31371 208 aaPredicted RBP10.88□□□□□ -0.67
NPHP4-202ENST00000378161 ACVR1BP36896 505 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 SNRPGP62308 76 aaKnown RBP10.88□□□□□ -0.67
NPHP4-202ENST00000378161 SP3Q02447 781 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 HERPUD1Q15011 391 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 LAIR1Q6GTX8 287 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 CHST9Q7L1S5 443 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 APCDD1Q8J025 514 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 ZNF738Q8NE65 137 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 IGSF8Q969P0 613 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 SENP5Q96HI0 755 aaPredicted RBP10.88□□□□□ -0.67
NPHP4-202ENST00000378161 SCLYQ96I15 445 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 TM7SF3Q9NS93 570 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 GABRQQ9UN88 632 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 ERAL1O75616 437 aaKnown RBP10.88□□□□□ -0.67
NPHP4-202ENST00000378161 MUC1P15941 1255 aaPredicted RBP10.88□□□□□ -0.67
NPHP4-202ENST00000378161 TBPP20226 339 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 AGAP20933 346 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 GAGE1Q13065 139 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 CEACAM20Q6UY09 585 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 CYHR1Q6ZMK1 362 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 GALNTL5Q7Z4T8 443 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 NUDT9Q9BW91 350 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 A0A0D9SEW6 157 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 TMEM129A0AVI4 362 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 LANCL1O43813 399 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 KAT7O95251 611 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 AMY2AP04746 511 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 ACP2P11117 423 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 ETFAP13804 333 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 ELNP15502 786 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 AKT2P31751 481 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 DEFB115Q30KQ5 88 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 DCST2Q5T1A1 773 aa10.88□□□□□ -0.67
NPHP4-202ENST00000378161 TPGS2Q68CL5 300 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms