RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 CHERPQ8IWX8 916 aaKnown RBP11.55□□□□□ -0.56
CBWD3-203ENST00000377344 MCEMP1Q8IX19 187 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 TCEANCQ8N8B7 351 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 OR9K2Q8NGE7 335 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 OR52E2Q8NGJ4 325 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 OR4K13Q8NH42 304 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 ZPLD1Q8TCW7 415 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 TXNDC15Q96J42 360 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 IL4I1Q96RQ9 567 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 TXNIPQ9H3M7 391 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 FANCFQ9NPI8 374 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 GPR52Q9Y2T5 361 aa11.55□□□□□ -0.56
CBWD3-203ENST00000377344 AHRRA9YTQ3 701 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 E9PQ18 207 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 ARPC3O15145 178 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 SURF4O15260 269 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 DENRO43583 198 aaKnown RBP11.54□□□□□ -0.56
CBWD3-203ENST00000377344 TLX2O43763 284 aaPredicted RBP11.54□□□□□ -0.56
CBWD3-203ENST00000377344 IDH3BO43837 385 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 PRKYO43930 277 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 IFNGP01579 166 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 ACADSP16219 412 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 PCYT1AP49585 367 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 BIDP55957 195 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 CLDN17P56750 224 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 RPL27P61353 136 aaKnown RBP11.54□□□□□ -0.56
CBWD3-203ENST00000377344 KRR1Q13601 381 aaKnown RBP11.54□□□□□ -0.56
CBWD3-203ENST00000377344 GPR139Q6DWJ6 353 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 ABLIM2Q6H8Q1 611 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 USP51Q70EK9 711 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 FAM122BQ7Z309 247 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 ENTHD1Q8IYW4 607 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 SDR9C7Q8NEX9 313 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 RNF128Q8TEB7 428 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 EMC6Q9BV81 110 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 SF3B5Q9BWJ5 86 aaKnown RBP11.54□□□□□ -0.56
CBWD3-203ENST00000377344 CMC2Q9NRP2 79 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 KLHL9Q9P2J3 617 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 AASSQ9UDR5 926 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 RNF6Q9Y252 685 aa11.54□□□□□ -0.56
CBWD3-203ENST00000377344 LOC102725191A0A1B0GVB3 256 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 FIGNL2A6NMB9 653 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 KDM4EB2RXH2 506 aaPredicted RBP11.53□□□□□ -0.56
CBWD3-203ENST00000377344 H7C1C5 153 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 PRRG2O14669 202 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 ARHGEF9O43307 516 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 TRAF3IP2O43734 574 aaPredicted RBP11.53□□□□□ -0.56
CBWD3-203ENST00000377344 TGM6O95932 706 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 FCGR2AP12318 317 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 APEHP13798 732 aaKnown RBP11.53□□□□□ -0.56
CBWD3-203ENST00000377344 EDN3P14138 238 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 ZNF3P17036 446 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 MYF6P23409 242 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 LCN6P62502 163 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 RBPJQ06330 500 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.53□□□□□ -0.56
CBWD3-203ENST00000377344 POU4F3Q15319 338 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 SF3B4Q15427 424 aaKnown RBP eCLIP11.53□□□□□ -0.56
CBWD3-203ENST00000377344 EMC4Q5J8M3 183 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 GTF2IRD2BQ6EKJ0 949 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 RPTNQ6XPR3 784 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 CREB3L2Q70SY1 520 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 THAP5Q7Z6K1 395 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 GTF2IRD2Q86UP8 949 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 ARIH2OSQ8N7S6 290 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 FAM57AQ8TBR7 257 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 NMNAT3Q96T66 252 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 CLEC4AQ9UMR7 237 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 ZNF175Q9Y473 711 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 ATRXP46100 2492 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 SVILO95425 2214 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 FAM183AA6NL82 134 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 ZNF726A6NNF4 738 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 ZNF716A6NP11 495 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 IMPA2O14732 288 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 ATXN7O15265 892 aaPredicted RBP11.53□□□□□ -0.56
CBWD3-203ENST00000377344 SLC19A2O60779 497 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 WDR1O75083 606 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 IGHMP01871 453 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 GABRA1P14867 456 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 ACVR2AP27037 513 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 CD47Q08722 323 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 RNPS1Q15287 305 aaKnown RBP11.53□□□□□ -0.56
CBWD3-203ENST00000377344 ACSF3Q4G176 576 aaPredicted RBP11.53□□□□□ -0.56
CBWD3-203ENST00000377344 MESTQ5EB52 335 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 CARD17Q5XLA6 110 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 LEG1Q6P5S2 330 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 C3P1Q6ZMU1 363 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 CYB561A3Q8NBI2 242 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 OR8J1Q8NGP2 316 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 CNIH3Q8TBE1 160 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 TMEM163Q8TC26 289 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 ASB10Q8WXI3 467 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 ZNF385AQ96PM9 386 aaKnown RBP11.53□□□□□ -0.56
CBWD3-203ENST00000377344 ZNF226Q9NYT6 803 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 SH3BGRL2Q9UJC5 107 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 KLHL21Q9UJP4 597 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 FLVCR1Q9Y5Y0 555 aa11.53□□□□□ -0.56
CBWD3-203ENST00000377344 CACNA1BQ00975 2339 aa11.52□□□□□ -0.56
CBWD3-203ENST00000377344 SLC35F4A4IF30 521 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms