RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 TYW3Q6IPR3 259 aaKnown RBP11.21□□□□□ -0.61
VRK3-202ENST00000377011 SLC25A25Q6KCM7 469 aa11.21□□□□□ -0.61
VRK3-202ENST00000377011 OLIG3Q7RTU3 272 aa11.21□□□□□ -0.61
VRK3-202ENST00000377011 NOXA1Q86UR1 476 aa11.21□□□□□ -0.61
VRK3-202ENST00000377011 SULF2Q8IWU5 870 aa11.21□□□□□ -0.61
VRK3-202ENST00000377011 SLC43A2Q8N370 569 aa11.21□□□□□ -0.61
VRK3-202ENST00000377011 TMEM203Q969S6 136 aa11.21□□□□□ -0.61
VRK3-202ENST00000377011 SLC35A4Q96G79 324 aa11.21□□□□□ -0.61
VRK3-202ENST00000377011 ZNF649Q9BS31 505 aa11.21□□□□□ -0.61
VRK3-202ENST00000377011 C11orf54Q9H0W9 315 aaPredicted RBP11.21□□□□□ -0.61
VRK3-202ENST00000377011 KCNN2Q9H2S1 579 aa11.21□□□□□ -0.61
VRK3-202ENST00000377011 PPP1R3EQ9H7J1 279 aa11.21□□□□□ -0.61
VRK3-202ENST00000377011 RNF121Q9H920 327 aa11.21□□□□□ -0.61
VRK3-202ENST00000377011 MAT2BQ9NZL9 334 aa11.21□□□□□ -0.61
VRK3-202ENST00000377011 H2AFY2Q9P0M6 372 aaPredicted RBP11.21□□□□□ -0.61
VRK3-202ENST00000377011 CBLCQ9ULV8 474 aa11.21□□□□□ -0.61
VRK3-202ENST00000377011 GPR52Q9Y2T5 361 aa11.21□□□□□ -0.61
VRK3-202ENST00000377011 GPR55Q9Y2T6 319 aaPredicted RBP11.21□□□□□ -0.61
VRK3-202ENST00000377011 NOX1Q9Y5S8 564 aa11.21□□□□□ -0.61
VRK3-202ENST00000377011 MYO7BQ6PIF6 2116 aa11.21□□□□□ -0.61
VRK3-202ENST00000377011 BLACEA4D250 179 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 ANKUB1A6NFN9 424 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 B4DXG7 233 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 GABRPO00591 440 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 CBX7O95931 251 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 AK1P00568 194 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 MYL9P24844 172 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 MTNR1BP49286 362 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 FUT7Q11130 342 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 TRIQKQ629K1 86 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 HIST2H2BCQ6DN03 193 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 ZCCHC12Q6PEW1 402 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 SIAH3Q8IW03 269 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 TCTE3Q8IZS6 198 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 TMEM156Q8N614 296 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 ZNF441Q8N8Z8 693 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 DUSP18Q8NEJ0 188 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 ENKURQ8TC29 256 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 C17orf50Q8WW18 174 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 KAT2AQ92830 837 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 KCTD12Q96CX2 325 aaKnown RBP11.21□□□□□ -0.62
VRK3-202ENST00000377011 GAL3ST4Q96RP7 486 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 ATF6BQ99941 703 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 GON7Q9BXV9 100 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 QRSL1Q9H0R6 528 aaKnown RBP11.21□□□□□ -0.62
VRK3-202ENST00000377011 CTPS2Q9NRF8 586 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 TNFRSF10DQ9UBN6 386 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 ERRFI1Q9UJM3 462 aaPredicted RBP11.21□□□□□ -0.62
VRK3-202ENST00000377011 TMEM5Q9Y2B1 443 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 WDR45Q9Y484 360 aa11.21□□□□□ -0.62
VRK3-202ENST00000377011 GTF3C1Q12789 2109 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 CELSR2Q9HCU4 2923 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 DNAJC13O75165 2243 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 A0A087WV62 115 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 TRAPPC13A5PLN9 417 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 SOX30O94993 753 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 DBIP07108 87 aaKnown RBP11.2□□□□□ -0.62
VRK3-202ENST00000377011 CCL3P10147 92 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 ERP29P30040 261 aaKnown RBP11.2□□□□□ -0.62
VRK3-202ENST00000377011 MAP2K3P46734 347 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 EVX1P49640 407 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 SSR4P51571 173 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 EEF1A1P68104 462 aaKnown RBP11.2□□□□□ -0.62
VRK3-202ENST00000377011 BICRALQ6AI39 1079 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 SLC30A6Q6NXT4 461 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 ZNF322Q6U7Q0 402 aaPredicted RBP11.2□□□□□ -0.62
VRK3-202ENST00000377011 FAM180AQ6UWF9 173 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 ZNF836Q6ZNA1 936 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 CXXC5Q7LFL8 322 aaKnown RBP11.2□□□□□ -0.62
VRK3-202ENST00000377011 FGD2Q7Z6J4 655 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 NKAIN4Q8IVV8 208 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 NRMQ8IXM6 262 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 PRR22Q8IZ63 422 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 BCORP1Q8N888 145 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 C19orf18Q8NEA5 215 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 OR52L1Q8NGH7 329 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 NEIL3Q8TAT5 605 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 ADIPOR1Q96A54 375 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 TM9SF2Q99805 663 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 WWTR1Q9GZV5 400 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 ZNF350Q9GZX5 532 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 PIGUQ9H490 435 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 PROK2Q9HC23 129 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 EQTNQ9NQ60 294 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 POLE3Q9NRF9 147 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 RBFOX1Q9NWB1 397 aaKnown RBP11.2□□□□□ -0.62
VRK3-202ENST00000377011 YARS2Q9Y2Z4 477 aaKnown RBP11.2□□□□□ -0.62
VRK3-202ENST00000377011 HRH3Q9Y5N1 445 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 MED12Q93074 2177 aa11.2□□□□□ -0.62
VRK3-202ENST00000377011 FREM3P0C091 2139 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 UNC119BA6NIH7 251 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 NPIPA5E9PKD4 350 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 PLA2G10O15496 165 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 RGS9O75916 674 aaPredicted RBP11.19□□□□□ -0.62
VRK3-202ENST00000377011 ALX3O95076 343 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 GUSBP08236 651 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 SLC2A2P11168 524 aaPredicted RBP11.19□□□□□ -0.62
VRK3-202ENST00000377011 TGM4P49221 684 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 MEOX1P50221 254 aa11.19□□□□□ -0.62
VRK3-202ENST00000377011 ZNF136P52737 540 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms