RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 NHLRC1Q6VVB1 395 aa12.36□□□□□ -0.43
NELFE-201ENST00000375425 HDXQ7Z353 690 aa12.36□□□□□ -0.43
NELFE-201ENST00000375425 MYPOPQ86VE0 399 aaPredicted RBP12.36□□□□□ -0.43
NELFE-201ENST00000375425 C20orf196Q8IYI0 205 aa12.36□□□□□ -0.43
NELFE-201ENST00000375425 DPP10Q8N608 796 aa12.36□□□□□ -0.43
NELFE-201ENST00000375425 C10orf53Q8N6V4 93 aa12.36□□□□□ -0.43
NELFE-201ENST00000375425 SCAIQ8N9R8 606 aa12.36□□□□□ -0.43
NELFE-201ENST00000375425 STON2Q8WXE9 905 aa12.36□□□□□ -0.43
NELFE-201ENST00000375425 TXNDC15Q96J42 360 aa12.36□□□□□ -0.43
NELFE-201ENST00000375425 SORCS2Q96PQ0 1159 aa12.36□□□□□ -0.43
NELFE-201ENST00000375425 CGREF1Q99674 301 aa12.36□□□□□ -0.43
NELFE-201ENST00000375425 MCHR1Q99705 422 aa12.36□□□□□ -0.43
NELFE-201ENST00000375425 VRK1Q99986 396 aaPredicted RBP12.36□□□□□ -0.43
NELFE-201ENST00000375425 ZNF385DQ9H6B1 395 aa12.36□□□□□ -0.43
NELFE-201ENST00000375425 MED29Q9NX70 200 aa12.36□□□□□ -0.43
NELFE-201ENST00000375425 TRIM33Q9UPN9 1127 aa12.36□□□□□ -0.43
NELFE-201ENST00000375425 COL6A5A8TX70 2615 aa12.36□□□□□ -0.43
NELFE-201ENST00000375425 SLC35F4A4IF30 521 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 ZNF99A8MXY4 864 aaPredicted RBP12.35□□□□□ -0.43
NELFE-201ENST00000375425 M0R3H8 397 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 ANGPT2O15123 496 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 SEC14L2O76054 403 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 OPN1SWP03999 348 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 USF1P22415 310 aaPredicted RBP12.35□□□□□ -0.43
NELFE-201ENST00000375425 ARR3P36575 388 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 CAPZA2P47755 286 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 IDH3GP51553 393 aaPredicted RBP12.35□□□□□ -0.43
NELFE-201ENST00000375425 POU3F1Q03052 451 aaPredicted RBP12.35□□□□□ -0.43
NELFE-201ENST00000375425 PUDPQ08623 228 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 RBBP4Q09028 425 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 C6orf52Q5T4I8 152 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 SWT1Q5T5J6 900 aaKnown RBP12.35□□□□□ -0.43
NELFE-201ENST00000375425 LINC00114Q6XXX2 140 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 SLC46A3Q7Z3Q1 461 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 MDP1Q86V88 176 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 CCDC36Q8IYA8 594 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 ANKS4BQ8N8V4 417 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 GPR32P1Q8NGA4 272 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 OR4F15Q8NGB8 312 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 OR6T1Q8NGN1 323 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 LRR1Q96L50 414 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 TMEM43Q9BTV4 400 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 NPHS2Q9NP85 383 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 MRPL39Q9NYK5 338 aaKnown RBP12.35□□□□□ -0.43
NELFE-201ENST00000375425 NOX1Q9Y5S8 564 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 FKBP7Q9Y680 259 aa12.35□□□□□ -0.43
NELFE-201ENST00000375425 CHD3Q12873 2000 aaKnown RBP12.34□□□□□ -0.43
NELFE-201ENST00000375425 CPSF4LA6NMK7 179 aaKnown RBP12.34□□□□□ -0.43
NELFE-201ENST00000375425 VSTM5A8MXK1 200 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 PLPP3O14495 311 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 FMO6PO60774 539 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 PDE5AO76074 875 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 C8BP07358 591 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 AHCYP23526 432 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 PDLIM4P50479 330 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 NPRL3Q12980 569 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 CAMK2DQ13557 499 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 EFNB3Q15768 340 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 NPTX1Q15818 432 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 CHRFAM7AQ494W8 412 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 CYB5R2Q6BCY4 276 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 ZNF613Q6PF04 617 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 PXKQ7Z7A4 578 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 WDFY1Q8IWB7 410 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 NUP37Q8NFH4 326 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 IL17RDQ8NFM7 739 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 OR10A6Q8NH74 314 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 TSPEARQ8WU66 669 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 ARHGDIGQ99819 225 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 PLK3Q9H4B4 646 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 KAT8Q9H7Z6 458 aaKnown RBP12.34□□□□□ -0.43
NELFE-201ENST00000375425 ARFGEF3Q5TH69 2177 aa12.34□□□□□ -0.43
NELFE-201ENST00000375425 IGHV2OR16-5A0A0B4J2B6 119 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 A0A0G2JND7 137 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 ZNF726A6NNF4 738 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 VWC2LB2RUY7 222 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 CHP2O43745 196 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 SERPINI2O75830 405 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 IFNA2P01563 188 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 HLA-HP01893 362 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 ADORA3P0DMS8 318 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 THBS4P35443 961 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 LSM11P83369 360 aaKnown RBP eCLIP12.33□□□□□ -0.442e-7■□□□□ 8.4
NELFE-201ENST00000375425 NFYCQ13952 458 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 CARTPTQ16568 116 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 ENTPD8Q5MY95 495 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 CXXC5Q7LFL8 322 aaKnown RBP12.33□□□□□ -0.44
NELFE-201ENST00000375425 RBM45Q8IUH3 476 aaKnown RBP12.33□□□□□ -0.44
NELFE-201ENST00000375425 OR4D11Q8NGI4 311 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 OR5J2Q8NH18 312 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 FOXN4Q96NZ1 517 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 KCNK17Q96T54 332 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 VIPAS39Q9H9C1 493 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 B3GAT2Q9NPZ5 323 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 B3GNT2Q9NY97 397 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 USP22Q9UPT9 525 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 POFUT2Q9Y2G5 429 aa12.33□□□□□ -0.44
NELFE-201ENST00000375425 MXRA5Q9NR99 2828 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 LOC390937A0A1W2PQ73 354 aa12.32□□□□□ -0.44
NELFE-201ENST00000375425 C11orf98E9PRG8 122 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms