RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 JMJD6Q6NYC1 403 aaPredicted RBP11.14□□□□□ -0.63
C9orf3-203ENST00000375315 KRT77Q7Z794 578 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 TSTD1Q8NFU3 115 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 ZNF75AQ96N20 296 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 MAP3K3Q99759 626 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 WFDC6Q9BQY6 131 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 TCEAL2Q9H3H9 227 aaPredicted RBP11.14□□□□□ -0.63
C9orf3-203ENST00000375315 SOCS6O14544 535 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 PLRG1O43660 514 aaKnown RBP11.14□□□□□ -0.63
C9orf3-203ENST00000375315 MUC1P15941 1255 aaPredicted RBP11.14□□□□□ -0.63
C9orf3-203ENST00000375315 UBE2MP61081 183 aaKnown RBP11.14□□□□□ -0.63
C9orf3-203ENST00000375315 PDE7AQ13946 482 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 ZNF345Q14585 488 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 NDUFAF6Q330K2 333 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 RPL13AP3Q6NVV1 102 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 GID4Q8IVV7 300 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 OR2L2Q8NH16 312 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 OR1E3Q8WZA6 343 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 CPNE4Q96A23 557 aaPredicted RBP11.14□□□□□ -0.63
C9orf3-203ENST00000375315 PRRC1Q96M27 445 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 TMEM68Q96MH6 324 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 INSM2Q96T92 566 aaPredicted RBP11.14□□□□□ -0.63
C9orf3-203ENST00000375315 C1QTNF2Q9BXJ5 285 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 EGLN1Q9GZT9 426 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 MAN2C1Q9NTJ4 1040 aa11.14□□□□□ -0.63
C9orf3-203ENST00000375315 H7BY64 318 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 TERTO14746 1132 aaKnown RBP11.13□□□□□ -0.63
C9orf3-203ENST00000375315 VEGFDO43915 354 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 SEMA4FO95754 770 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 CEACAM5P06731 702 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 MPC1LP0DKB6 136 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 TBXA2RP21731 343 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 CERS1P27544 350 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 DCTDP32321 178 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 PNLIPRP2P54317 469 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 ENPP2Q13822 863 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 TMEM200AQ86VY9 491 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 MUC20Q8N307 709 aaPredicted RBP11.13□□□□□ -0.63
C9orf3-203ENST00000375315 C14orf79Q96F83 325 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 PRAP1Q96NZ9 151 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 PPP4R1LQ9P1A2 415 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 KLF15Q9UIH9 416 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 A0A1B0GWJ7 208 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 ACOT7O00154 380 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 SLC31A2O15432 143 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 OIP5O43482 229 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 ACVR1BP36896 505 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 VASPP50552 380 aaPredicted RBP11.13□□□□□ -0.63
C9orf3-203ENST00000375315 TAS2R60P59551 318 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 RPS13P62277 151 aaKnown RBP11.13□□□□□ -0.63
C9orf3-203ENST00000375315 SLBPQ14493 270 aaKnown RBP eCLIP11.13□□□□□ -0.63
C9orf3-203ENST00000375315 MLF2Q15773 248 aaPredicted RBP11.13□□□□□ -0.63
C9orf3-203ENST00000375315 BEST3Q8N1M1 668 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 GTPBP8Q8N3Z3 284 aaPredicted RBP11.13□□□□□ -0.63
C9orf3-203ENST00000375315 OR10H4Q8NGA5 316 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 OR9A1PQ8NGU1 263 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 OR5J2Q8NH18 312 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 RAB8BQ92930 207 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 FBXO17Q96EF6 278 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 SPSB2Q99619 263 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 VRK1Q99986 396 aaPredicted RBP11.13□□□□□ -0.63
C9orf3-203ENST00000375315 WDR13Q9H1Z4 485 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 CHMP1AQ9HD42 196 aaPredicted RBP11.13□□□□□ -0.63
C9orf3-203ENST00000375315 UQCC1Q9NVA1 299 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 MMP17Q9ULZ9 603 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 TRAV14DV4A0A0A6YYC5 116 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 OR6C76A6NM76 312 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 SYT5O00445 386 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 SLC16A5O15375 505 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 RDH16O75452 317 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 ACTL6AO96019 429 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 SRFP11831 508 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 GNSP15586 552 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 SPCS3P61009 180 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 PGGHGQ32M88 737 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 NKAPLQ5M9Q1 402 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 GLT8D1Q68CQ7 371 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 Q6ZSR6 202 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 RHOUQ7L0Q8 258 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 CPOQ8IVL8 374 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 TMEM99Q8N816 258 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 OR13H1Q8NG92 308 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 OR4E2Q8NGC2 313 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 OR4Q3Q8NH05 313 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 OR10G6Q8NH81 332 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 C1orf216Q8TAB5 229 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 STOML3Q8TAV4 291 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 GUCD1Q96NT3 240 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 GGACTQ9BVM4 153 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 CNIH4Q9P003 139 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 LHX6Q9UPM6 363 aa11.13□□□□□ -0.63
C9orf3-203ENST00000375315 METTL21EPA6NDL7 271 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 J3QRE1 110 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 RTCAO00442 366 aaKnown RBP11.12□□□□□ -0.63
C9orf3-203ENST00000375315 ALPPL2P10696 532 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 AGAP20933 346 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 NRG3P56975 720 aa11.12□□□□□ -0.63
C9orf3-203ENST00000375315 MRPS21P82921 87 aaKnown RBP11.12□□□□□ -0.63
C9orf3-203ENST00000375315 ILF3Q12906 894 aaKnown RBP eCLIP11.12□□□□□ -0.63
C9orf3-203ENST00000375315 ZNF813Q6ZN06 617 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms