RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ALG12Q9BV10 488 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 PBX4Q9BYU1 374 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 AMBRA1Q9C0C7 1298 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 POMT2Q9UKY4 750 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 TMEM218A2RU14 115 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 PRSS23O95084 383 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF239Q16600 458 aaKnown RBP9.45□□□□□ -0.9
PTCH1-204ENST00000375290 NTNG2Q96CW9 530 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 MYEF2Q9P2K5 600 aaKnown RBP9.45□□□□□ -0.9
PTCH1-204ENST00000375290 ACTL7AQ9Y615 435 aa9.45□□□□□ -0.9
PTCH1-204ENST00000375290 A0A1W2PPK0 400 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 OR2C1O95371 312 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 CTSLP07711 333 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 H2AFB1P0C5Y9 115 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 HTRA4P83105 476 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 REEP5Q00765 189 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 GCNT2Q8N0V5 402 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF385DQ9H6B1 395 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 PARPBPQ9NWS1 579 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF586Q9NXT0 402 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 SLC35F4A4IF30 521 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF217O75362 1048 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 GLDNQ6ZMI3 551 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 Q6ZTK2 550 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 LSMEM1Q8N8F7 131 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 KIRREL1Q96J84 757 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 POFUT1Q9H488 388 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF160Q9HCG1 818 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 CYSLTR2Q9NS75 346 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 ACER3Q9NUN7 267 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 A0A0G2JN53 185 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 B4DEV8 164 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 STMND1H3BQB6 276 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 GSK3AP49840 483 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 GDF6Q6KF10 455 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 GPRIN1Q7Z2K8 1008 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 RABEPKQ7Z6M1 372 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 MDGA1Q8NFP4 955 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 SLC25A43Q8WUT9 341 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 SLCO4A1Q96BD0 722 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 GMLQ99445 158 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 CRLF2Q9HC73 371 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 PHIPQ8WWQ0 1821 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 SLC17A1Q14916 467 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 SLC25A30Q5SVS4 291 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF648Q5T619 568 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 ATPAF1Q5TC12 328 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 EGLN2Q96KS0 407 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 FYTTD1Q96QD9 318 aaKnown RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 CDCA3Q99618 268 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 GPR55Q9Y2T6 319 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 GPR171O14626 319 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 HOXC11O43248 304 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 VAMP5O95183 116 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 MSX1P28360 303 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF93P35789 620 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 TOMM34Q15785 309 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 CYP27C1Q4G0S4 372 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 DAZAP1Q96EP5 407 aaKnown RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 IGLON5A6NGN9 336 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 TBX19O60806 448 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 RRASP10301 218 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 ACY1Q03154 408 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 CIB3Q96Q77 187 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 KCNK12Q9HB15 430 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 FABP1P07148 127 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 YPEL5P62699 121 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 KIAA0141Q14154 515 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 GDE1Q9NZC3 331 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 NCDNQ9UBB6 729 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 OR52A1Q9UKL2 312 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 HMX2A2RU54 273 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 ANXA7P20073 488 aaKnown RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 SLCO4C1Q6ZQN7 724 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 RCBTB1Q8NDN9 531 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 OR5M8Q8NGP6 311 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 CPNE4Q96A23 557 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-204ENST00000375290 LMF1Q96S06 567 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 NOX4Q9NPH5 578 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 KIAA1551Q9HCM1 1747 aa9.44□□□□□ -0.9
PTCH1-204ENST00000375290 SCN7AQ01118 1682 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 DNAJC25-GNG10A0A024R161 153 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 IGHEP01854 428 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 MMP7P09237 267 aaPredicted RBP9.43□□□□□ -0.9
PTCH1-204ENST00000375290 HNRNPA1L2Q32P51 320 aaKnown RBP9.43□□□□□ -0.9
PTCH1-204ENST00000375290 OR5M11Q96RB7 305 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 SLC39A9Q9NUM3 307 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 NPIPB15A6NHN6 443 aaPredicted RBP9.43□□□□□ -0.9
PTCH1-204ENST00000375290 B4GALT2O60909 372 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 P4HA3Q7Z4N8 544 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 MKXQ8IYA7 352 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 ZDHHC22Q8N966 263 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 SDR9C7Q8NEX9 313 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 LKAAEAR1Q8TD35 194 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 FOXJ1Q92949 421 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 ABHD6Q9BV23 337 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 HAPLN2Q9GZV7 340 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 BCO1Q9HAY6 547 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 GALNT9Q9HCQ5 603 aa9.43□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF391Q9UJN7 358 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms