RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 NAT2P11245 290 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 TMEM11P17152 192 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 PODNL1Q6PEZ8 512 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 OR13C8Q8NGS7 320 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 TMED6Q8WW62 240 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 KHSRPQ92945 711 aaKnown RBP eCLIP14.22□□□□□ -0.13
COL5A1-201ENST00000371817 HRASLS2Q9NWW9 162 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 TMEM269A0A1B0GVZ9 245 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 ADM5C9JUS6 153 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 AP1G1O43747 822 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 CSO75390 466 aaKnown RBP14.22□□□□□ -0.13
COL5A1-201ENST00000371817 CT45A10P0DMU9 189 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 WDR74Q6RFH5 385 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-201ENST00000371817 DYNC2LI1Q8TCX1 351 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 ZNF354AO60765 605 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-201ENST00000371817 JUNBP17275 347 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-201ENST00000371817 ZNF280AP59817 542 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-201ENST00000371817 CELF5Q8N6W0 485 aaKnown RBP14.22□□□□□ -0.13
COL5A1-201ENST00000371817 ELOVL3Q9HB03 270 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 PLEK2Q9NYT0 353 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 TRDV1A0A1B0GX56 115 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 ATP1B3P54709 279 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 CLDN12P56749 244 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 ZNF528Q3MIS6 628 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 MEX3DQ86XN8 651 aaKnown RBP14.22□□□□□ -0.13
COL5A1-201ENST00000371817 ABHD4Q8TB40 342 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 GHSRQ92847 366 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 CHRDL1Q9BU40 450 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 OR52D1Q9H346 318 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 PRO1933Q9H354 126 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 ZNF816-ZNF321PA0A0X1KG74 233 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 SERTM2A0A1B0GWG4 89 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 CR2P20023 1033 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 PCSK6P29122 969 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 Q6ZRG5 221 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 ZNF321PQ8N8H1 164 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 ALOXE3Q9BYJ1 711 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 CLEC3BP05452 202 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 LMNTD1Q8N9Z9 388 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 AKR1E2Q96JD6 320 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 KCNK6Q9Y257 313 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 SLC35A3Q9Y2D2 325 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 PEAK1Q9H792 1746 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 K7ERU9 68 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 TGM5O43548 720 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 TNFSF4P23510 183 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 HTR3AP46098 478 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 ZNF133P52736 654 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-201ENST00000371817 LANCL3Q6ZV70 420 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 SLC46A3Q7Z3Q1 461 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 NECTIN4Q96NY8 510 aa14.22□□□□□ -0.13
COL5A1-201ENST00000371817 MED12Q93074 2177 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 FAM166BA8MTA8 275 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 CATSPERDQ86XM0 798 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 PRSS35Q8N3Z0 413 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 RELL2Q8NC24 303 aaPredicted RBP14.21□□□□□ -0.13
COL5A1-201ENST00000371817 ADAMTS18Q8TE60 1221 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 GPR173Q9NS66 373 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 TRAV27A0A087WT01 109 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 CPNE6O95741 557 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 VIPR2P41587 438 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 RUNX2Q13950 521 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 FAM182AQ5T1J6 154 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 TMEM123Q8N131 208 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 KCNG3Q8TAE7 436 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 C1orf74Q96LT6 269 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 XKRY2A2RUG3 117 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 ACOD1A6NK06 481 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 FBLP22087 321 aaKnown RBP14.21□□□□□ -0.13
COL5A1-201ENST00000371817 ZFP62Q8NB50 900 aaPredicted RBP14.21□□□□□ -0.13
COL5A1-201ENST00000371817 OR13C5Q8NGS8 318 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 STT3BQ8TCJ2 826 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 MVB12BQ9H7P6 319 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 NECAP2Q9NVZ3 263 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 A0A0D9SEW6 157 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 MCRIP1C9JLW8 97 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 CCR7P32248 378 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 OPRD1P41143 372 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 SRP9P49458 86 aaKnown RBP14.21□□□□□ -0.13
COL5A1-201ENST00000371817 GATMP50440 423 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 NKAIN3Q8N8D7 197 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 OR51S1Q8NGJ8 323 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 ABHD6Q9BV23 337 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 GPR45Q9Y5Y3 372 aa14.21□□□□□ -0.13
COL5A1-201ENST00000371817 TTRP02766 147 aa14.21□□□□□ -0.14
COL5A1-201ENST00000371817 SDHAP31040 664 aa14.21□□□□□ -0.14
COL5A1-201ENST00000371817 XCR1P46094 333 aa14.21□□□□□ -0.14
COL5A1-201ENST00000371817 SIRPAP78324 504 aa14.21□□□□□ -0.14
COL5A1-201ENST00000371817 FAM180BQ6P0A1 224 aa14.21□□□□□ -0.14
COL5A1-201ENST00000371817 KLHDC8AQ8IYD2 350 aa14.21□□□□□ -0.14
COL5A1-201ENST00000371817 DVL3Q92997 716 aaPredicted RBP14.21□□□□□ -0.14
COL5A1-201ENST00000371817 TIMM29Q9BSF4 260 aa14.21□□□□□ -0.14
COL5A1-201ENST00000371817 RNF208Q9H0X6 261 aa14.21□□□□□ -0.14
COL5A1-201ENST00000371817 PTPRMP28827 1452 aa14.21□□□□□ -0.14
COL5A1-201ENST00000371817 HSBP1O75506 76 aa14.21□□□□□ -0.14
COL5A1-201ENST00000371817 PSMB6P28072 239 aa14.21□□□□□ -0.14
COL5A1-201ENST00000371817 C22orf39Q6P5X5 142 aa14.21□□□□□ -0.14
COL5A1-201ENST00000371817 CHAC2Q8WUX2 184 aa14.21□□□□□ -0.14
COL5A1-201ENST00000371817 TMEM106AQ96A25 262 aa14.21□□□□□ -0.14
COL5A1-201ENST00000371817 OR5B2Q96R09 309 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms