RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 SMPDL3BQ92485 455 aa14.65□□□□□ -0.06
SYNCRIP-202ENST00000369622 ZFP57Q9NU63 452 aa14.65□□□□□ -0.06
SYNCRIP-202ENST00000369622 CHD9Q3L8U1 2897 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 TMEM218A2RU14 115 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 PRICKLE3O43900 615 aaPredicted RBP14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 CLN5O75503 358 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 HIST1H2ABP04908 130 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 FBP1P09467 338 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 RBMS1P29558 406 aaKnown RBP14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 UBXN2BQ14CS0 331 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 C2orf27AQ580R0 203 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 PRAMEF8Q5VWM4 474 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 PRAMEF7Q5VXH5 474 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 HIST3H2AQ7L7L0 130 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 VN1R4Q7Z5H5 301 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 ASPGQ86U10 573 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 EIF4E3Q8N5X7 224 aaKnown RBP14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 CCL4L1Q8NHW4 92 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 GTF3AQ92664 365 aaKnown RBP14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 HIST1H2ACQ93077 130 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 TIMP4Q99727 224 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 PRSS27Q9BQR3 290 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 RAB11FIP5Q9BXF6 653 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 SRMSQ9H3Y6 488 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 NOX3Q9HBY0 568 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 TREM1Q9NP99 234 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 PCDHB10Q9UN67 800 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 C1orf196B1AJZ1 125 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 KLF4O43474 513 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 KHDRBS3O75525 346 aaKnown RBP14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 S100A8P05109 93 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 HNRNPA1P09651 372 aaKnown RBP eCLIP14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 TLX1P31314 330 aaPredicted RBP14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 ACTR1AP61163 376 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 LRRTM1Q86UE6 522 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 MFSD9Q8NBP5 474 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 FAM98AQ8NCA5 519 aaKnown RBP14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 OR4K13Q8NH42 304 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 ZDHHC12Q96GR4 267 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 TNFRSF13CQ96RJ3 184 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 WDR13Q9H1Z4 485 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 FGF22Q9HCT0 170 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 KLK11Q9UBX7 282 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 TBC1D29Q9UFV1 150 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 MED31Q9Y3C7 131 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 SZT2Q5T011 3432 aa14.64□□□□□ -0.07
SYNCRIP-202ENST00000369622 CXorf65A6NEN9 183 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 RCBTB2O95199 551 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 UGT2B7P16662 529 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 ADH6P28332 368 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 GABRA3P34903 492 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 NR0B1P51843 470 aaKnown RBP14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 TANGO2Q6ICL3 276 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 RAB12Q6IQ22 244 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 ZNF433Q8N7K0 673 aaPredicted RBP14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 TMEM138Q9NPI0 162 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 SLC25A12O75746 678 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 RLN1P04808 185 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 SBK2P0C263 348 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 MUC1P15941 1255 aaPredicted RBP14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 PSMB1P20618 241 aaKnown RBP14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 CNR1P21554 472 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 BDKRB2P30411 391 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 GJA4P35212 333 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 VASPP50552 380 aaPredicted RBP14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 RAP2BP61225 183 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 MAT1AQ00266 395 aaKnown RBP14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 RUNX2Q13950 521 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 SSX2Q16385 188 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 DCST2Q5T1A1 773 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 B3GNTL1Q67FW5 361 aaPredicted RBP14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 PRSS41Q7RTY9 318 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 SDR9C7Q8NEX9 313 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 OR5T3Q8NGG3 340 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 OR52E2Q8NGJ4 325 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 SMARCD2Q92925 531 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 ASB16Q96NS5 453 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 NPDC1Q9NQX5 325 aaPredicted RBP14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 DZANK1Q9NVP4 752 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 ANKRD61A6NGH8 418 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 SLC22A31A6NKX4 558 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 H3BSH0 61 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 BHLHE40O14503 412 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 STX11O75558 287 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 GIPP09681 153 aaPredicted RBP14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 GRPRP30550 384 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 VEGFBP49765 207 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 ACSM1Q08AH1 577 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 MICBQ29980 383 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 GXYLT1Q4G148 440 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 ENPP7Q6UWV6 458 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 SLC29A4Q7RTT9 530 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 HAVCR2Q8TDQ0 301 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 VRK1Q99986 396 aaPredicted RBP14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 SLC17A9Q9BYT1 436 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 FN3KQ9H479 309 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 KCNE5Q9UJ90 142 aa14.63□□□□□ -0.07
SYNCRIP-202ENST00000369622 CACNA1IQ9P0X4 2223 aa14.62□□□□□ -0.07
SYNCRIP-202ENST00000369622 ZNF729A6NN14 1252 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms