RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ZADH2Q8N4Q0 377 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 CD300LFQ8TDQ1 290 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 FGF14Q92915 247 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 RBMXL1Q96E39 390 aaKnown RBP2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 TGM7Q96PF1 710 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 GIN1Q9NXP7 522 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 XCL2Q9UBD3 114 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 LAMP5Q9UJQ1 280 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 AURKCQ9UQB9 309 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 DOCK8Q8NF50 2099 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 C6orf47O95873 294 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 BGLAPP02818 100 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 CISD3P0C7P0 127 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 IGHV3-43DP0DP04 118 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 GNA11P29992 359 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 SOX6P35712 828 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 NCBP2P52298 156 aaKnown RBP eCLIP2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 HTD2P86397 168 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 KLHL30Q0D2K2 578 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 XKR4Q5GH76 650 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 FAM92BQ6ZTR7 304 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 ECHDC2Q86YB7 292 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 ZDHHC21Q8IVQ6 265 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 MYOCDQ8IZQ8 938 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 C15orf56Q8N910 161 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 SYT14Q8NB59 555 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 UBE2E3Q969T4 207 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 OR2A5Q96R48 311 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 ECSITQ9BQ95 431 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 GBA3Q9H227 469 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 LRRN3Q9H3W5 708 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 RPH3ALQ9UNE2 315 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 MRPS33Q9Y291 106 aaKnown RBP2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 POLDIP2Q9Y2S7 368 aa2.26□□□□□ -2.05
RNU4-28P-201ENST00000364739 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 IGKV1D-13A0A0B4J2D9 117 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 A0A1B0GVX0 72 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 METTL21EPA6NDL7 271 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 ZNF705GA8MUZ8 300 aaPredicted RBP2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 H3BNH8 94 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 IGKV1-13P0DP09 117 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 CHI3L1P36222 383 aaPredicted RBP2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 CACNG7P62955 275 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 TNFRSF17Q02223 184 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 AQP6Q13520 282 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 TTLL9Q3SXZ7 439 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 COA6Q5JTJ3 125 aaKnown RBP2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 ZNF880Q6PDB4 577 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 CCDC50Q8IVM0 306 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 PIANPQ8IYJ0 282 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 FAM133AQ8N9E0 248 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 FNDC5Q8NAU1 212 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 OR52P1PQ8NH57 321 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 NHEJ1Q9H9Q4 299 aaPredicted RBP2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 UGT1A7Q9HAW7 530 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 UGT1A10Q9HAW8 530 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 UGT1A8Q9HAW9 530 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 LY9Q9HBG7 655 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 TM9SF3Q9HD45 589 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 GGA2Q9UJY4 613 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 TMCO1Q9UM00 188 aa2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 GPATCH8Q9UKJ3 1502 aaKnown RBP2.25□□□□□ -2.05
RNU4-28P-201ENST00000364739 CEMIPQ8WUJ3 1361 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 IGHV5-51A0A0C4DH38 117 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 C7orf66A4D0T2 115 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 INS-IGF2F8WCM5 200 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 XKRYO14609 159 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 XPO1O14980 1071 aaKnown RBP2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 POLR2DO15514 142 aaKnown RBP2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 ZDHHC11BP0C7U3 371 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 OMGP23515 440 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 KLRB1Q12918 225 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 OR5I1Q13606 314 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 FBXW9Q5XUX1 488 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 SHISA6Q6ZSJ9 500 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 TRIM69Q86WT6 500 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 ARRDC1Q8N5I2 433 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 ANKFN1Q8N957 763 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 VN1R2Q8NFZ6 395 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 ZNF461Q8TAF7 563 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 GEMIN6Q8WXD5 167 aaKnown RBP2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 CLCC1Q96S66 551 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 FOXC2Q99958 501 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 GABARAPL3Q9BY60 117 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 RANBP3Q9H6Z4 567 aaPredicted RBP2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 POLE3Q9NRF9 147 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 ZNF355PQ9NSJ1 428 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 KCNIP3Q9Y2W7 256 aa2.24□□□□□ -2.05
RNU4-28P-201ENST00000364739 WDR62O43379 1518 aa2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 TRAV40A0A0B4J280 105 aa2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 SRP72O76094 671 aaKnown RBP2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 IL12AP29459 219 aa2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 RPL13AP40429 203 aaKnown RBP2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 PPT1P50897 306 aa2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 RPS21P63220 83 aaKnown RBP2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 SLC36A3Q495N2 470 aa2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 TTC23Q5W5X9 447 aa2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 MMAAQ8IVH4 418 aaKnown RBP2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 TRMT10AQ8TBZ6 339 aaKnown RBP2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 FAM110BQ8TC76 370 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms