RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 PAK1IP1Q9NWT1 392 aaPredicted RBP22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 SPRR3Q9UBC9 169 aa22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 ALPK2Q86TB3 2170 aa22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 FAM183AA6NL82 134 aa22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 PRR23D1E9PI22 279 aaPredicted RBP22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 SMAD9O15198 467 aaKnown RBP22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 CXCL13O43927 109 aa22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 SMIM18P0DKX4 95 aa22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 PRR23D2P0DMB1 279 aaPredicted RBP22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 SLC15A1P46059 708 aa22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 POU3F1Q03052 451 aaPredicted RBP22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 POU4F3Q15319 338 aa22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 TMEM225Q6GV28 225 aa22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 MEIOBQ8N635 442 aa22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 C9orf43Q8TAL5 461 aaPredicted RBP22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 CPNE4Q96A23 557 aaPredicted RBP22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 SNX18Q96RF0 628 aa22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 HCAR1Q9BXC0 346 aa22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 TIGARQ9NQ88 270 aa22.23■■□□□ 1.15
SHARPIN-201ENST00000359551 CLCA1A8K7I4 914 aa22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 CPN1P15169 458 aa22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 PAICSP22234 425 aaKnown RBP22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 ENPP1P22413 925 aa22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 ACVR2AP27037 513 aa22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 CDKN2AP42771 156 aaKnown RBP22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 EIF1AXP47813 144 aaKnown RBP22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 DAP3P51398 398 aaKnown RBP22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 APOFQ13790 326 aa22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 NIPAL3Q6P499 406 aa22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 ADCK1Q86TW2 530 aa22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 GID4Q8IVV7 300 aa22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 IPCEF1Q8WWN9 437 aaPredicted RBP22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 RFKQ969G6 155 aa22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 UCN2Q96RP3 112 aa22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 NMNAT3Q96T66 252 aa22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 TIMP4Q99727 224 aa22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 RHNO1Q9BSD3 238 aa22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 NMNAT2Q9BZQ4 307 aa22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 AMBNQ9NP70 447 aa22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 RPL36Q9Y3U8 105 aaKnown RBP22.22■■□□□ 1.15
SHARPIN-201ENST00000359551 SNTNA6NMZ2 147 aa22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 M0R3G1 203 aa22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 TRAF3IP2O43734 574 aaPredicted RBP22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 SERPINI2O75830 405 aa22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 FAM87AP0C7U9 286 aa22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 ZNF91Q05481 1191 aa22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 FAM205BPQ63HN1 556 aa22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 SLC35D2Q76EJ3 337 aa22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 UEVLDQ8IX04 471 aa22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 CYB561A3Q8NBI2 242 aa22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 BBS1Q8NFJ9 593 aa22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 TSPAN14Q8NG11 270 aa22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 ASB10Q8WXI3 467 aa22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 GGHQ92820 318 aa22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 PNPLA2Q96AD5 504 aa22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 PRORYQ9H606 182 aa22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 EXO5Q9H790 373 aa22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 PAQR5Q9NXK6 330 aaPredicted RBP22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 CNOT2Q9NZN8 540 aaKnown RBP22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.21■■□□□ 1.15
SHARPIN-201ENST00000359551 OR6C68A6NDL8 312 aa22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 TRIM64CA6NLI5 447 aa22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 EIF4E1BA6NMX2 242 aaKnown RBP22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 DBTP11182 482 aaKnown RBP22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 PIPP12273 146 aaPredicted RBP22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 IFNGR1P15260 489 aa22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 SLC2A5P22732 501 aa22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 ACVR1BP36896 505 aa22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 CDH15P55291 814 aa22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 RPS3AP61247 264 aaKnown RBP22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 JAZF1Q86VZ6 243 aa22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 ZNF540Q8NDQ6 660 aa22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 SGCDQ92629 289 aa22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 WDYHV1Q96HA8 205 aa22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 SIGLEC11Q96RL6 698 aa22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 SF3B5Q9BWJ5 86 aaKnown RBP22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 TSPAN10Q9H1Z9 355 aaPredicted RBP22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 MED20Q9H944 212 aa22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 CCNB1IP1Q9NPC3 277 aa22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 MRPS18AQ9NVS2 196 aaKnown RBP22.2■■□□□ 1.15
SHARPIN-201ENST00000359551 A6NIZ1 184 aa22.2■■□□□ 1.14
SHARPIN-201ENST00000359551 NPIPA5E9PKD4 350 aa22.2■■□□□ 1.14
SHARPIN-201ENST00000359551 AQP7O14520 342 aa22.2■■□□□ 1.14
SHARPIN-201ENST00000359551 BCL10O95999 233 aa22.2■■□□□ 1.14
SHARPIN-201ENST00000359551 HTR1AP08908 422 aa22.2■■□□□ 1.14
SHARPIN-201ENST00000359551 HTR1FP30939 366 aa22.2■■□□□ 1.14
SHARPIN-201ENST00000359551 SLC25A1P53007 311 aa22.2■■□□□ 1.14
SHARPIN-201ENST00000359551 CDH11P55287 796 aa22.2■■□□□ 1.14
SHARPIN-201ENST00000359551 RAP1BP61224 184 aa22.2■■□□□ 1.14
SHARPIN-201ENST00000359551 RAP1AP62834 184 aa22.2■■□□□ 1.14
SHARPIN-201ENST00000359551 ABLIM2Q6H8Q1 611 aa22.2■■□□□ 1.14
SHARPIN-201ENST00000359551 LEG1Q6P5S2 330 aa22.2■■□□□ 1.14
SHARPIN-201ENST00000359551 ZPLD1Q8TCW7 415 aa22.2■■□□□ 1.14
SHARPIN-201ENST00000359551 H2AFY2Q9P0M6 372 aaPredicted RBP22.2■■□□□ 1.14
SHARPIN-201ENST00000359551 SCOCQ9UIL1 159 aa22.2■■□□□ 1.14
SHARPIN-201ENST00000359551 NPIPA1Q9UND3 350 aa22.2■■□□□ 1.14
SHARPIN-201ENST00000359551 IGHV3-15A0A0B4J1V0 119 aa22.19■■□□□ 1.14
SHARPIN-201ENST00000359551 EFCAB10A6NFE3 127 aa22.19■■□□□ 1.14
SHARPIN-201ENST00000359551 PTGES3LE9PB15 166 aa22.19■■□□□ 1.14
SHARPIN-201ENST00000359551 MRPS14O60783 128 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms