RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PRPH2P23942 346 aa17.02■□□□□ 0.31
SHANK1-202ENST00000359082 C9orf152Q5JTZ5 239 aa17.02■□□□□ 0.31
SHANK1-202ENST00000359082 NAT6Q93015 286 aa17.02■□□□□ 0.31
SHANK1-202ENST00000359082 DHRS4Q9BTZ2 278 aa17.02■□□□□ 0.31
SHANK1-202ENST00000359082 PBX4Q9BYU1 374 aa17.02■□□□□ 0.31
SHANK1-202ENST00000359082 PATZ1Q9HBE1 687 aaKnown RBP17.02■□□□□ 0.31
SHANK1-202ENST00000359082 TRAV36DV7A0A075B6V5 113 aa17.02■□□□□ 0.31
SHANK1-202ENST00000359082 MTCH1Q9NZJ7 389 aa17.02■□□□□ 0.31
SHANK1-202ENST00000359082 LHX6Q9UPM6 363 aa17.02■□□□□ 0.31
SHANK1-202ENST00000359082 CLDN24A6NM45 220 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 OR8U8P0C7N1 319 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 MRPL43Q8N983 215 aaKnown RBP17.01■□□□□ 0.31
SHANK1-202ENST00000359082 PIGTQ969N2 578 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 GON7Q9BXV9 100 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 NT5DC2Q9H857 520 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 OSGIN2Q9Y236 505 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 KCNK2O95069 426 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 CT45A6P0DMU7 189 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 CT45A5P0DMU8 189 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 CT45A7P0DMV0 189 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 CT45A8P0DMV1 189 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 CT45A9P0DMV2 189 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 SLC5A2P31639 672 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 CT45A2Q5DJT8 189 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 CT45A1Q5HYN5 189 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 RBMS3Q6XE24 437 aaKnown RBP17.01■□□□□ 0.31
SHANK1-202ENST00000359082 MARCH3Q86UD3 253 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 CT45A3Q8NHU0 189 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 GHSRQ92847 366 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 DUSP13Q9UII6 198 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 GJA4P35212 333 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 SLC14A2Q15849 920 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 SMAP2Q8WU79 429 aaPredicted RBP17.01■□□□□ 0.31
SHANK1-202ENST00000359082 OPA3Q9H6K4 179 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 FAM212BQ9NTI7 297 aaPredicted RBP17.01■□□□□ 0.31
SHANK1-202ENST00000359082 GSTP1P09211 210 aaKnown RBP17.01■□□□□ 0.31
SHANK1-202ENST00000359082 AADACP22760 399 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 CPT2P23786 658 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 GPLD1P80108 840 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 ABHD4Q8TB40 342 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 FGGYQ96C11 551 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 NIPAL2Q9H841 368 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 PCDHGA5Q9Y5G8 931 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 CASP3P42574 277 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 GSK3AP49840 483 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 RAP2BP61225 183 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 COX20Q5RI15 118 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 SFXN4Q6P4A7 337 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 RFLNAQ6ZTI6 216 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 DHCR7Q9UBM7 475 aaKnown RBP17.01■□□□□ 0.31
SHANK1-202ENST00000359082 NUMBLQ9Y6R0 609 aa17.01■□□□□ 0.31
SHANK1-202ENST00000359082 GRPP07492 148 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 MMP12P39900 470 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 SLC1A3P43003 542 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 MFAP5Q13361 173 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 PLPP5Q8NEB5 264 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 ARRDC2Q8TBH0 407 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 LIPHQ8WWY8 451 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 RPL3LQ92901 407 aaKnown RBP17■□□□□ 0.31
SHANK1-202ENST00000359082 PIGQQ9BRB3 760 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 ADAM29Q9UKF5 820 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 DDAH2O95865 285 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 MTHFD2P13995 350 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 CBR1P16152 277 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 DPP4P27487 766 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 HOXC13P31276 330 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 CPEB2Q7Z5Q1 589 aaKnown RBP17■□□□□ 0.31
SHANK1-202ENST00000359082 ENTHD1Q8IYW4 607 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 SLC43A2Q8N370 569 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 FRMD1Q8N878 549 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 QPCTLQ9NXS2 382 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 PIGLQ9Y2B2 252 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 MYH11P35749 1972 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 SELENOFO60613 162 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 OLFM2O95897 454 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 SYT13Q7L8C5 426 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 UTP4Q969X6 686 aaKnown RBP17■□□□□ 0.31
SHANK1-202ENST00000359082 ERVMER34-1Q9H9K5 563 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 APOA2P02652 100 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 ALPLP05186 524 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 NFYBP25208 207 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 GCAP28676 217 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 ACSM1Q08AH1 577 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 EDDM3AQ14507 147 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 TRIM61Q5EBN2 209 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 OR1S2Q8NGQ3 325 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 HRASLS5Q96KN8 279 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 SLC6A17Q9H1V8 727 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 POFUT1Q9H488 388 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 TM7SF3Q9NS93 570 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 ADAM12O43184 909 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 IGHEP01854 428 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 HBG1P69891 147 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 HBG2P69892 147 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 ARHGAP11BQ3KRB8 267 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 PLK5Q496M5 336 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 ZC3HAV1Q7Z2W4 902 aaKnown RBP17■□□□□ 0.31
SHANK1-202ENST00000359082 SUMF1Q8NBK3 374 aa17■□□□□ 0.31
SHANK1-202ENST00000359082 I6L893 689 aaPredicted RBP16.99■□□□□ 0.31
SHANK1-202ENST00000359082 OPCMLQ14982 345 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms