RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 POU4F3Q15319 338 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 MFSD6LQ8IWD5 586 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 CCDC28AQ8IWP9 274 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 NOL4LQ96MY1 436 aaPredicted RBP9.08□□□□□ -0.96
CHD3-202ENST00000358181 FCRL5Q96RD9 977 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 UQCC2Q9BRT2 126 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 HSD3B7Q9H2F3 369 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 LPAR2Q9HBW0 351 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 EMC7Q9NPA0 242 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 CDC14BO60729 498 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 ETFAP13804 333 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 HSD17B1P14061 328 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 PRDX6P30041 224 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 OR1D5P58170 312 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 DCDP81605 110 aaKnown RBP9.07□□□□□ -0.96
CHD3-202ENST00000358181 ZNF404Q494X3 552 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 TMEM207Q6UWW9 146 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 CCDC190Q86UF4 302 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 ZNF689Q96CS4 500 aaPredicted RBP9.07□□□□□ -0.96
CHD3-202ENST00000358181 PARP12Q9H0J9 701 aaKnown RBP9.07□□□□□ -0.96
CHD3-202ENST00000358181 MMP27Q9H306 513 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 OR6C2Q9NZP2 312 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 ZIM2Q9NZV7 527 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 A0A096LPE4 126 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 A0A1W2PPZ6 126 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 BLVRBP30043 206 aaPredicted RBP9.07□□□□□ -0.96
CHD3-202ENST00000358181 TAS2R31P59538 309 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 CXCR4P61073 352 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 SERTAD2Q14140 314 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 ANKRD54Q6NXT1 300 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 CISD2Q8N5K1 135 aaKnown RBP9.07□□□□□ -0.96
CHD3-202ENST00000358181 MDGA1Q8NFP4 955 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 PHOX2BQ99453 314 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 OR51I2Q9H344 312 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 ZFP57Q9NU63 452 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 BABAM2Q9NXR7 383 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 HELTA6NFD8 242 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 C7P10643 843 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 FPR1P21462 350 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 NME2P22392 152 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 TIA1P31483 386 aaKnown RBP eCLIP9.07□□□□□ -0.96
CHD3-202ENST00000358181 DHRS7BQ6IAN0 325 aaPredicted RBP9.07□□□□□ -0.96
CHD3-202ENST00000358181 DHRS11Q6UWP2 260 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 ZDHHC24Q6UX98 284 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 TMEM64Q6YI46 380 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 YRDCQ86U90 279 aaKnown RBP9.07□□□□□ -0.96
CHD3-202ENST00000358181 SMG8Q8ND04 991 aaKnown RBP9.07□□□□□ -0.96
CHD3-202ENST00000358181 OR5A2Q8NGI9 324 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 OR6T1Q8NGN1 323 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 ALG8Q9BVK2 526 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 CRLF2Q9HC73 371 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 CD300AQ9UGN4 299 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 DPM1O60762 260 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 SLC5A2P31639 672 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 ENTPD8Q5MY95 495 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 FRMPD2BQ6IN97 320 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 VWA1Q6PCB0 445 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 TSEN54Q7Z6J9 526 aaKnown RBP9.07□□□□□ -0.96
CHD3-202ENST00000358181 TMEM25Q86YD3 366 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 LINC00346Q8IVM7 164 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 DUSP19Q8WTR2 217 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 KIAA1191Q96A73 305 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 SOX7Q9BT81 388 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 KCND3Q9UK17 655 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 DUOX1Q9NRD9 1551 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 NCR1O76036 304 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 IQCF3P0C7M6 154 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 OR5H8P0DN80 308 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 CDK4P11802 303 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 TPT1P13693 172 aaKnown RBP9.07□□□□□ -0.96
CHD3-202ENST00000358181 C6orf15Q6UXA7 325 aaPredicted RBP9.07□□□□□ -0.96
CHD3-202ENST00000358181 VASH2Q86V25 355 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 DCAF4L2Q8NA75 395 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 BLNKQ8WV28 456 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 GLTPQ9NZD2 209 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 ZNF443Q9Y2A4 671 aaPredicted RBP9.07□□□□□ -0.96
CHD3-202ENST00000358181 IGHV3-20A0A0C4DH32 117 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 FAM157AC9JC47 383 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 ARPC1BO15143 372 aaKnown RBP9.07□□□□□ -0.96
CHD3-202ENST00000358181 BMPR1AP36894 532 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 SLC35D2Q76EJ3 337 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 DTWD2Q8NBA8 298 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 BEST4Q8NFU0 473 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 OR7G3Q8NG95 312 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 OR51H1Q8NH63 302 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 ZBTB8AQ96BR9 441 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 ABCG5Q9H222 651 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 SLIT2O94813 1529 aa9.07□□□□□ -0.96
CHD3-202ENST00000358181 COL14A1Q05707 1796 aaKnown RBP9.07□□□□□ -0.96
CHD3-202ENST00000358181 HRH2P25021 359 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 KCNJ8Q15842 424 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 ANKRD34AQ69YU3 496 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 RBPMS2Q6ZRY4 209 aaKnown RBP9.06□□□□□ -0.96
CHD3-202ENST00000358181 GTF2H5Q6ZYL4 71 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 CLECL1Q8IZS7 167 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 IQCKQ8N0W5 287 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 ANGPTL6Q8NI99 470 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 UTP4Q969X6 686 aaKnown RBP9.06□□□□□ -0.96
CHD3-202ENST00000358181 ALG12Q9BV10 488 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 BARHL1Q9BZE3 327 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms