RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 FAM122BQ7Z309 247 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 TMED4Q7Z7H5 227 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 YAF2Q8IY57 180 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 OR51A7Q8NH64 312 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 OR52I2Q8NH67 350 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 PFN4Q8NHR9 129 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 ELP5Q8TE02 316 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 GRHL3Q8TE85 626 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 POM121Q96HA1 1249 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 HCAR1Q9BXC0 346 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 GPN1Q9HCN4 374 aaPredicted RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 OBP2AQ9NY56 170 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 AKAP7Q9P0M2 348 aaPredicted RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 TBC1D29Q9UFV1 150 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 SPEGQ15772 3267 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 KANTRA0A1W2PQU2 76 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 MEX3AA1L020 520 aaKnown RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 TMEM218A2RU14 115 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 F5H0A9 414 aaPredicted RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 SURF4O15260 269 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 MAGEB4O15481 346 aaPredicted RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 CHST10O43529 356 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 CNR1P21554 472 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 HABP2Q14520 560 aaPredicted RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 MLC1Q15049 377 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 TAF13Q15543 124 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 OR7A5Q15622 319 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 ZIC1Q15915 447 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 DUSP5Q16690 384 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 PRRT3Q5FWE3 981 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 MRM1Q6IN84 353 aaKnown RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 ADAM5Q6NVV9 412 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 CXXC5Q7LFL8 322 aaKnown RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 LINC00471Q8N535 108 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 TMEM99Q8N816 258 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 FGF11Q92914 225 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 RFKQ969G6 155 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 TSACCQ96A04 125 aaPredicted RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 ACTRT3Q9BYD9 372 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 SLC17A9Q9BYT1 436 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 PLA2G2FQ9BZM2 168 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 SLITRK2Q9H156 845 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 FGF20Q9NP95 211 aaPredicted RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 C20orf141Q9NUB4 165 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 FAM86C1Q9NVL1 165 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 CES1P1Q9UKY3 287 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 KIF26AQ9ULI4 1882 aaPredicted RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 OR2AT4A6NND4 320 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 RHPN2P1A8MT19 583 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 PEX12O00623 359 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 BRINP1O60477 761 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 RGS9O75916 674 aaPredicted RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 IGHV2-70P01814 119 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 GIPP09681 153 aaPredicted RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 SAGP10523 405 aaPredicted RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 CLUP10909 449 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 DAOP14920 347 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 PVRP15151 417 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 HPGDP15428 266 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 ADCYAP1P18509 176 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 DCTDP32321 178 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 IGFALSP35858 605 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 RIDAP52758 137 aaKnown RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 EFNB1P98172 346 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 ZNF155Q12901 538 aaPredicted RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 MAPK14Q16539 360 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 OR52W1Q6IF63 320 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 CDC73Q6P1J9 531 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 ENPP7Q6UWV6 458 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 TMEM64Q6YI46 380 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 FRRS1Q6ZNA5 592 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 ZNF546Q86UE3 836 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 NRROSQ86YC3 692 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 OR2T33Q8NG76 320 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 OR10R2Q8NGX6 335 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 OSTF1Q92882 214 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 SEC22AQ96IW7 307 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 RPP25Q9BUL9 199 aaKnown RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 PBX4Q9BYU1 374 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 UBQLN3Q9H347 655 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 HRASLSQ9HDD0 168 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 POLE3Q9NRF9 147 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 ZNF629Q9UEG4 869 aaPredicted RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 SIRT4Q9Y6E7 314 aaPredicted RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 TRIOO75962 3097 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 HIST1H2ABP04908 130 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 CA3P07451 260 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 NDUFV2P19404 249 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 TBXA2RP21731 343 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 CPT2P23786 658 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 NOS3P29474 1203 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 GPM6BQ13491 265 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 PLEKHN1Q494U1 663 aaPredicted RBP8.59□□□□□ -1.03
SMG6-202ENST00000354901 AADACL4Q5VUY2 407 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 MFSD12Q6NUT3 480 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 ZNF836Q6ZNA1 936 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 ZNF620Q6ZNG0 422 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 HIST3H2AQ7L7L0 130 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 PRSS41Q7RTY9 318 aa8.59□□□□□ -1.03
SMG6-202ENST00000354901 OR2W3Q7Z3T1 314 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms