RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 RPTNQ6XPR3 784 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 CREB3L2Q70SY1 520 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 SLC35D2Q76EJ3 337 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 UEVLDQ8IX04 471 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 SLC43A2Q8N370 569 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 RPRMLQ8N4K4 120 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 ANKK1Q8NFD2 765 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 MUS81Q96NY9 551 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 ZNF385AQ96PM9 386 aaKnown RBP16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 EMC6Q9BV81 110 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 TXNIPQ9H3M7 391 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 ZNF226Q9NYT6 803 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 MCTS1Q9ULC4 181 aaKnown RBP16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 RAB26Q9ULW5 256 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 PCDHGB5Q9Y5G0 923 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 SPTA1P02549 2419 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 SLC22A20A6NK97 555 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 AHRRA9YTQ3 701 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 ARPC3O15145 178 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 SURF4O15260 269 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 PRKYO43930 277 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 TXNDC12O95881 172 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 HIST1H1CP16403 213 aaKnown RBP16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 ABOP16442 354 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 HSPA13P48723 471 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 EFNB1P98172 346 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 POU4F3Q15319 338 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 EEF1A1P5Q5VTE0 462 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 C3P1Q6ZMU1 363 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 SEM1Q6ZVN7 128 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 PTCHD4Q6ZW05 846 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 C9orf106Q8NAJ2 232 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 ZNF519Q8TB69 540 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 FAM81AQ8TBF8 368 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 ASB10Q8WXI3 467 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 PRRG4Q9BZD6 226 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 ZNF175Q9Y473 711 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 LRRC42Q9Y546 428 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 FAM215AQ9Y5M1 114 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 NOX1Q9Y5S8 564 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 FLVCR1Q9Y5Y0 555 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 DOCK7Q96N67 2140 aa16.9■□□□□ 0.3
CHMP4A-201ENST00000347519 A0A1W2PRG6 482 aa16.89■□□□□ 0.3
CHMP4A-201ENST00000347519 VAMP5O95183 116 aa16.89■□□□□ 0.3
CHMP4A-201ENST00000347519 APEHP13798 732 aaKnown RBP16.89■□□□□ 0.3
CHMP4A-201ENST00000347519 ZNF43P17038 809 aa16.89■□□□□ 0.3
CHMP4A-201ENST00000347519 RPS6KA3P51812 740 aa16.89■□□□□ 0.3
CHMP4A-201ENST00000347519 SLC16A1P53985 500 aa16.89■□□□□ 0.3
CHMP4A-201ENST00000347519 RPL27P61353 136 aaKnown RBP16.89■□□□□ 0.3
CHMP4A-201ENST00000347519 C1DQ13901 141 aaKnown RBP16.89■□□□□ 0.3
CHMP4A-201ENST00000347519 MESTQ5EB52 335 aa16.89■□□□□ 0.3
CHMP4A-201ENST00000347519 DOLPP1Q86YN1 238 aa16.89■□□□□ 0.3
CHMP4A-201ENST00000347519 OR4K13Q8NH42 304 aa16.89■□□□□ 0.3
CHMP4A-201ENST00000347519 SF3B5Q9BWJ5 86 aaKnown RBP16.89■□□□□ 0.3
CHMP4A-201ENST00000347519 BAIAP2Q9UQB8 552 aa16.89■□□□□ 0.3
CHMP4A-201ENST00000347519 RNF6Q9Y252 685 aa16.89■□□□□ 0.3
CHMP4A-201ENST00000347519 GCN1Q92616 2671 aaKnown RBP16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 IGKV3D-15A0A087WSY6 115 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 H7C1C5 153 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 SLC19A2O60779 497 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 PRB1P04280 392 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 SDHAP31040 664 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 ACVR1BP36896 505 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 CDKN2AP42771 156 aaKnown RBP16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 BIDP55957 195 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 CLDN17P56750 224 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 LCN6P62502 163 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 KRR1Q13601 381 aaKnown RBP16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 TAF11Q15544 211 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 SNAPC1Q16533 368 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 C1orf185Q5T7R7 199 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 ENTHD1Q8IYW4 607 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 ARIH2OSQ8N7S6 290 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 TCEANCQ8N8B7 351 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 SDR9C7Q8NEX9 313 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 OR52E2Q8NGJ4 325 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 HDAC2Q92769 488 aaKnown RBP16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 IL4I1Q96RQ9 567 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 DDOQ99489 341 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 NDEL1Q9GZM8 345 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 RNF122Q9H9V4 155 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 GRHPRQ9UBQ7 328 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 TINAGQ9UJW2 476 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 GPR52Q9Y2T5 361 aa16.89■□□□□ 0.29
CHMP4A-201ENST00000347519 SLC35F4A4IF30 521 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 NPIPB13A6NJU9 1138 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 NPIPB4C9JG80 1138 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 WDR1O75083 606 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 BCL10O95999 233 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 HMGN1P05114 100 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 GABRB1P18505 474 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 MYF6P23409 242 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 EDNRAP25101 427 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 PCYT1AP49585 367 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 ISL1P61371 349 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 CRMP1Q14194 572 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 PDK3Q15120 406 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 NSUN5P2Q63ZY6 315 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 GPR139Q6DWJ6 353 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms