RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 OR5L1Q8NGL2 311 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 OR5B3Q8NH48 314 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 RAB24Q969Q5 203 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 TRIB3Q96RU7 358 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 PCYT2Q99447 389 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 KCNMB3Q9NPA1 279 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 MED9Q9NWA0 146 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SPO11Q9Y5K1 396 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 LOC100289279A0A1B0GTE1 492 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 GLTPD2A6NH11 291 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 PLRG1O43660 514 aaKnown RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 POP4O95707 220 aaKnown RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 HIST1H1CP16403 213 aaKnown RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 TBPP20226 339 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 GCSHP23434 173 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 C21orf33P30042 268 aaPredicted RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 GJA4P35212 333 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 DAP3P51398 398 aaKnown RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 DGKZQ13574 1117 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 GBX1Q14549 363 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SHHQ15465 462 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 ZNF678Q5SXM1 525 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 UBE3DQ7Z6J8 389 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 THOC6Q86W42 341 aaKnown RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 OR13C8Q8NGS7 320 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 OR2G2Q8NGZ5 317 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 LHFPL5Q8TAF8 219 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 HMCESQ96FZ2 354 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 XYLT2Q9H1B5 865 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SUV39H2Q9H5I1 410 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 ELOVL2Q9NXB9 296 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 PRODH2Q9UF12 536 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 CACFD1Q9UGQ2 172 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 OARD1Q9Y530 152 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SNX11Q9Y5W9 270 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 USP54Q70EL1 1684 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 hCG_1809904A0A1W2PP81 198 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 A0A1W2PR64 198 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 A0A1W2PRV1 198 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 VSTM2BA6NLU5 285 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SIAH2O43255 324 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 HSBP1O75506 76 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 ADRA1BP35368 520 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 CEBPAP49715 358 aaPredicted RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 RACK1P63244 317 aaKnown RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 DSC2Q02487 901 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SLC23A1Q9UHI7 598 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SOX21Q9Y651 276 aaPredicted RBP5.76□□□□□ -1.49
VCAN-203ENST00000343200 ACAA1P09110 424 aaPredicted RBP5.75□□□□□ -1.49
VCAN-203ENST00000343200 ARP10275 920 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 VIPR1P32241 457 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 YBEYP58557 167 aaPredicted RBP5.75□□□□□ -1.49
VCAN-203ENST00000343200 RPEL1Q2QD12 228 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 ZNF718Q3SXZ3 478 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 OR2A2Q6IF42 318 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 ZNF322Q6U7Q0 402 aaPredicted RBP5.75□□□□□ -1.49
VCAN-203ENST00000343200 TMIGD1Q6UXZ0 262 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 CATSPERDQ86XM0 798 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 SLC46A2Q9BY10 475 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 KCNK15Q9H427 330 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 HES4Q9HCC6 221 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 MED17Q9NVC6 651 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 FBXO34Q9NWN3 711 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 SSUH2Q9Y2M2 353 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 TMEM131LA2VDJ0 1609 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 ADAM23O75077 832 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 TRAPPC6AO75865 159 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 POU3F4P49335 361 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 GDF10P55107 478 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 SLC36A2Q495M3 483 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 TMEM225Q6GV28 225 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 UNC5DQ6UXZ4 953 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 IGDCC3Q8IVU1 814 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 CFAP52Q8N1V2 620 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 OR2A1Q8NGT9 310 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 LRIG1Q96JA1 1093 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 TMEM43Q9BTV4 400 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 RIMS3Q9UJD0 308 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 GRXCR1A8MXD5 290 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 SIX3O95343 332 aaPredicted RBP5.75□□□□□ -1.49
VCAN-203ENST00000343200 NTSR2O95665 410 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 ALDOCP09972 364 aaKnown RBP5.75□□□□□ -1.49
VCAN-203ENST00000343200 PTHLHP12272 177 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 GNSP15586 552 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 BPIFB3P59826 476 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 AADACL3Q5VUY0 350 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 SUSD4Q5VX71 490 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 PLCXD3Q63HM9 321 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 DTWD1Q8N5C7 304 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 C2orf73Q8N5S3 287 aaPredicted RBP5.75□□□□□ -1.49
VCAN-203ENST00000343200 FOXN4Q96NZ1 517 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 NUDT22Q9BRQ3 303 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 NDFIP1Q9BT67 221 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 AKIRIN1Q9H9L7 192 aaPredicted RBP5.75□□□□□ -1.49
VCAN-203ENST00000343200 SLC35A3Q9Y2D2 325 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 ZNF835Q9Y2P0 537 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 ATRNL1Q5VV63 1379 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 CXorf49A8MYA2 514 aaPredicted RBP5.75□□□□□ -1.49
VCAN-203ENST00000343200 WDR1O75083 606 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 CELF2O95319 508 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms