RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 KATNB1Q9BVA0 655 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 POLDIP3Q9BY77 421 aaKnown RBP13.16□□□□□ -0.3
CSRP1-201ENST00000340006 SH3BGRL2Q9UJC5 107 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 HSPE1-MOB4S4R3N1 261 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 SMG1Q96Q15 3661 aaKnown RBP13.16□□□□□ -0.3
CSRP1-201ENST00000340006 CYTIPO60759 359 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 TGM6O95932 706 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 BCL10O95999 233 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 CD14P08571 375 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 TSPAN19P0C672 248 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 ACVR2AP27037 513 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 P2RY4P51582 365 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 EEF1A1P5Q5VTE0 462 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 DOLPP1Q86YN1 238 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 ST6GALNAC3Q8NDV1 305 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 OR8D4Q8NGM9 314 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 UBE2FQ969M7 185 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 BBC3Q96PG8 261 aaPredicted RBP13.16□□□□□ -0.3
CSRP1-201ENST00000340006 CALHM2Q9HA72 323 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 KLHL9Q9P2J3 617 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 ZNF346Q9UL40 294 aaKnown RBP13.16□□□□□ -0.3
CSRP1-201ENST00000340006 ADAM18Q9Y3Q7 739 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 ALPK2Q86TB3 2170 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 HOXD4P09016 255 aaPredicted RBP13.15□□□□□ -0.3
CSRP1-201ENST00000340006 FCGR2AP12318 317 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 IFNGR1P15260 489 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 PTGER4P35408 488 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 CASP6P55212 293 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 CDC42P60953 191 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 CDK5Q00535 292 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 SLC17A1Q14916 467 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 RNPS1Q15287 305 aaKnown RBP13.15□□□□□ -0.3
CSRP1-201ENST00000340006 ACSM5Q6NUN0 579 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 CASP12Q6UXS9 341 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 SLC35D2Q76EJ3 337 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 ENTHD1Q8IYW4 607 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 OR9K2Q8NGE7 335 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 CNIH3Q8TBE1 160 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 SF3B5Q9BWJ5 86 aaKnown RBP13.15□□□□□ -0.3
CSRP1-201ENST00000340006 TP63Q9H3D4 680 aaPredicted RBP13.15□□□□□ -0.3
CSRP1-201ENST00000340006 NRIP3Q9NQ35 241 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 RASSF1Q9NS23 344 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 IMPAD1Q9NX62 359 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 TVP23BQ9NYZ1 205 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 CLEC4AQ9UMR7 237 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 MYRFQ9Y2G1 1151 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 ZNF175Q9Y473 711 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 MED12LQ86YW9 2145 aa13.15□□□□□ -0.3
CSRP1-201ENST00000340006 ARHGAP21Q5T5U3 1957 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 ZNF726A6NNF4 738 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 PRB1P04280 392 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 PER3P56645 1201 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 CLDN17P56750 224 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 ACKR1Q16570 336 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 ACSF3Q4G176 576 aaPredicted RBP13.14□□□□□ -0.31
CSRP1-201ENST00000340006 SLX4IPQ5VYV7 408 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 CREB3L2Q70SY1 520 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 DEPDC4Q8N2C3 294 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 LRRC75AQ8NAA5 344 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 FBLIM1Q8WUP2 373 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 WNT2BQ93097 391 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 TXNDC15Q96J42 360 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 PLEKHA8Q96JA3 519 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 SLC38A2Q96QD8 506 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 EMC6Q9BV81 110 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 TXNIPQ9H3M7 391 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 ZNF696Q9H7X3 374 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 MED29Q9NX70 200 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 B3GAT1Q9P2W7 334 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 TINAGQ9UJW2 476 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 BAIAP2Q9UQB8 552 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 RNF6Q9Y252 685 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 ZNF835Q9Y2P0 537 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 SHANK1Q9Y566 2161 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 LOC102725191A0A1B0GVB3 256 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 A0A1W2PNV4 684 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 KDM4EB2RXH2 506 aaPredicted RBP13.14□□□□□ -0.31
CSRP1-201ENST00000340006 BHLHE40O14503 412 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 FZD7O75084 574 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 HMGN1P05114 100 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 ACVR1BP36896 505 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 RPL27P61353 136 aaKnown RBP13.14□□□□□ -0.31
CSRP1-201ENST00000340006 CDK5R2Q13319 367 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 MELKQ14680 651 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 MAD2L1BPQ15013 274 aaPredicted RBP13.14□□□□□ -0.31
CSRP1-201ENST00000340006 SNAPC1Q16533 368 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 C1orf185Q5T7R7 199 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 NSUN5P2Q63ZY6 315 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 B3GNT6Q6ZMB0 384 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 TUSC5Q8IXB3 177 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 OR4Q3Q8NH05 313 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 RNF128Q8TEB7 428 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 OTULINQ96BN8 352 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 Q96M85 177 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 TM9SF2Q99805 663 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 FANCFQ9NPI8 374 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 AASSQ9UDR5 926 aa13.14□□□□□ -0.31
CSRP1-201ENST00000340006 TRGV8A0A0C4DH27 118 aa13.13□□□□□ -0.31
CSRP1-201ENST00000340006 M0R129 80 aa13.13□□□□□ -0.31
CSRP1-201ENST00000340006 XKRYO14609 159 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms