RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 MSMPQ1L6U9 139 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 FAM91A1Q658Y4 838 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 LINC00114Q6XXX2 140 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 UEVLDQ8IX04 471 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 C20orf196Q8IYI0 205 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 LRRC17Q8N6Y2 441 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 VANGL1Q8TAA9 524 aaPredicted RBP11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 FGFBP3Q8TAT2 258 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 MAGEE2Q8TD90 523 aaPredicted RBP11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 MS4A3Q96HJ5 214 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 MAGEB18Q96M61 343 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 ARHGDIGQ99819 225 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 OBP2BQ9NPH6 170 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 B3GNT2Q9NY97 397 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 LEF1Q9UJU2 399 aaPredicted RBP11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 LOC102725191A0A1B0GVB3 256 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 OR6C65A6NJZ3 312 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 FBP2O00757 339 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 PLPP3O14495 311 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 TLX2O43763 284 aaPredicted RBP11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 EDF1O60869 148 aaKnown RBP11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 SASH3O75995 380 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 IGHV4-31P0DP07 118 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 TNFRSF1BP20333 461 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 DSCR9P59020 149 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 POU3F1Q03052 451 aaPredicted RBP11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 NFYCQ13952 458 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 GGTLC2Q14390 218 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 ENTPD8Q5MY95 495 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 HDXQ7Z353 690 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 DPP10Q8N608 796 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 OR10A6Q8NH74 314 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 TAMM41Q96BW9 452 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 KCNK17Q96T54 332 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 DOK1Q99704 481 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 KCNS3Q9BQ31 491 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 KATNB1Q9BVA0 655 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 SELENONQ9NZV5 590 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 TESQ9UGI8 421 aaKnown RBP11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 SLC13A4Q9UKG4 626 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 RCE1Q9Y256 329 aa11.58□□□□□ -0.56
NUDCD3-201ENST00000338427 IGHV2OR16-5A0A0B4J2B6 119 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 IGHV4-61A0A0C4DH41 118 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 A0A0G2JND7 137 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 PRORSD1PA6NEY8 169 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 HMGB1P1B2RPK0 211 aaPredicted RBP11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 VWC2LB2RUY7 222 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 LYNX1G3V0Z9 82 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 KPNA4O00629 521 aaPredicted RBP11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 SHOX2O60902 331 aaPredicted RBP11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 CH25HO95992 272 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 IGKV3-15P01624 115 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 LYNX1P0DP58 116 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 CD79AP11912 226 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 HOXB1P14653 301 aaPredicted RBP11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 CD247P20963 164 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 CRYBA2P53672 197 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 NCALDP61601 193 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 LSM11P83369 360 aaKnown RBP eCLIP11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 CYP51A1Q16850 503 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 C6orf52Q5T4I8 152 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 IL17RELQ6ZVW7 336 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 SLC46A3Q7Z3Q1 461 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 SPATA21Q7Z572 469 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 SVOPLQ8N434 492 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 C11orf65Q8NCR3 313 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 PIK3C3Q8NEB9 887 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 ZNF75AQ96N20 296 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 ASPNQ9BXN1 380 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 KAT8Q9H7Z6 458 aaKnown RBP11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 MRPL39Q9NYK5 338 aaKnown RBP11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 TAS2R5Q9NYW4 299 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 ANGPT4Q9Y264 503 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 POFUT2Q9Y2G5 429 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 SVEP1Q4LDE5 3571 aa11.57□□□□□ -0.56
NUDCD3-201ENST00000338427 ZNF726A6NNF4 738 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 ZNF99A8MXY4 864 aaPredicted RBP11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 B9A039 149 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 hCG_2039718K7EN88 272 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 ANGPT2O15123 496 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 ADORA3P0DMS8 318 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 BMP4P12644 408 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 IFNGR1P15260 489 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 SLC25A16P16260 332 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 USF1P22415 310 aaPredicted RBP11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 PDLIM4P50479 330 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 BIDP55957 195 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 SNRPD2P62316 118 aaKnown RBP11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 VLDLRP98155 873 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 SRSF2Q01130 221 aaKnown RBP11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 MELKQ14680 651 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 MFSD13AQ14CX5 517 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 RABL3Q5HYI8 236 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 MALRD1Q5VYJ5 2156 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 CYB5R2Q6BCY4 276 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 KRT80Q6KB66 452 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 NANOGP8Q6NSW7 305 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 C5orf46Q6UWT4 87 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 ZNF813Q6ZN06 617 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 CXXC5Q7LFL8 322 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms