RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 NHLRC1Q6VVB1 395 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 HDDC2Q7Z4H3 204 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 ABHD12BQ7Z5M8 362 aaPredicted RBP10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 AMIGO2Q86SJ2 522 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 HIPK1Q86Z02 1210 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 POMGNT2Q8NAT1 580 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 AQP11Q8NBQ7 271 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 OR13C2Q8NGS9 318 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 OR5K1Q8NHB7 308 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 LRTOMTQ8WZ04 291 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 CENPNQ96H22 339 aaPredicted RBP10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 TXNDC15Q96J42 360 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 HDHD5Q9BXW7 423 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 NTN4Q9HB63 628 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 S100A14Q9HCY8 104 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 STX18Q9P2W9 335 aaKnown RBP10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 SIGLEC7Q9Y286 467 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 SLC35F4A4IF30 521 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 ARRDC5A6NEK1 342 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 MCIDASD6RGH6 385 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 PRSS44E7EML9 344 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 G3V2T6 193 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 KLF4O43474 513 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 RNF224P0DH78 156 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 POU2F1P14859 743 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 NTF4P34130 210 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 CD79BP40259 229 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 PEX19P40855 299 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 SELENOPP49908 381 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 BIDP55957 195 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 RPS4XP62701 263 aaKnown RBP10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 RFX4Q33E94 735 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 ZNF770Q6IQ21 691 aaPredicted RBP10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 RPL13AP3Q6NVV1 102 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 SMARCD3Q6STE5 483 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 Q6ZT83 130 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 ZNF771Q7L3S4 317 aaPredicted RBP10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 TMEM179BQ7Z7N9 219 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 ZDHHC13Q8IUH4 622 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 GPR137CQ8N3F9 429 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 OR9Q2Q8NGE9 314 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 OR6N1Q8NGY5 312 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 OR6X1Q8NH79 312 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 GTPBP3Q969Y2 492 aaKnown RBP10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 LRR1Q96L50 414 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 FEVQ99581 238 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 GPA33Q99795 319 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 USB1Q9BQ65 265 aaKnown RBP10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 EMC6Q9BV81 110 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 DGCR6LQ9BY27 220 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 LINC00470Q9BZP3 86 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 SLCO5A1Q9H2Y9 848 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 TXNIPQ9H3M7 391 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 MCCC2Q9HCC0 563 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 B3GAT2Q9NPZ5 323 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 ASB6Q9NWX5 421 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 MED29Q9NX70 200 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 GRHPRQ9UBQ7 328 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 PRSS50Q9UI38 385 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 ZNF346Q9UL40 294 aaKnown RBP10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 GPR52Q9Y2T5 361 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 MYO18BQ8IUG5 2567 aa10.54□□□□□ -0.72
SPTLC1-202ENST00000337841 A6NIZ1 184 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 NPIPB13A6NJU9 1138 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 NPIPB4C9JG80 1138 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 C16orf97H3BN30 126 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 ZNF432O94892 652 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 BAG2O95816 211 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 ADAP00813 363 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 IGHV3-9P01782 118 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 CD14P08571 375 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 PRKACGP22612 351 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 SLC6A6P31641 620 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 RAP1BP61224 184 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 RPL27P61353 136 aaKnown RBP10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 RAP1AP62834 184 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 FAM27E3Q08E93 113 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 FAPQ12884 760 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 CAMK2DQ13557 499 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 FHL1Q13642 323 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 ACKR1Q16570 336 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 TSPO2Q5TGU0 170 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 CARD17Q5XLA6 110 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 FAM205BPQ63HN1 556 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 SP5Q6BEB4 398 aaPredicted RBP10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 GPR139Q6DWJ6 353 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 CD300LDQ6UXZ3 194 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 DPY19L2P2Q6ZN68 376 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 RASSF6Q6ZTQ3 369 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 SVOPLQ8N434 492 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 ATG16L2Q8NAA4 619 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 LRRC75AQ8NAA5 344 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 ZNF566Q969W8 418 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 SLC25A44Q96H78 314 aaPredicted RBP10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 PSMG3-AS1Q96PY0 264 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 OR2M2Q96R28 347 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 POLDIP3Q9BY77 421 aaKnown RBP10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 SLC24A3Q9HC58 644 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 SLC7A10Q9NS82 523 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms