RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 TMED6Q8WW62 240 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 MR1Q95460 341 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 KCNJ16Q9NPI9 418 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 SLC52A3Q9NQ40 469 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 NPIPA2E9PIF3 369 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 NPIPA3F8WFD2 350 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 AIFM1O95831 613 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 CD80P33681 288 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 PBX2P40425 430 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 PFN3P60673 137 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 HFEQ30201 348 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 ZNF852Q6ZMS4 543 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 OR4C15Q8NGM1 316 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 RNF141Q8WVD5 230 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 ZFPM2Q8WW38 1151 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 FAM46BQ96A09 425 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 P2RY12Q9H244 342 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 DNAJC13O75165 2243 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 DDX60Q8IY21 1712 aaKnown RBP14.85□□□□□ -0.03
NPHP3-201ENST00000337331 SLX4Q8IY92 1834 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 BTBD17A6NE02 478 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 ANKRD61A6NGH8 418 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 ZNF124Q15973 351 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 NDUFAF7Q7L592 441 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 OR5M9Q8NGP3 310 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 DCAF16Q9NXF7 216 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 PEX12O00623 359 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 NPC1O15118 1278 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 MED6O75586 246 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 ELAVL4P26378 380 aaKnown RBP14.84□□□□□ -0.03
NPHP3-201ENST00000337331 POU3F4P49335 361 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 PDX1P52945 283 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 PLA2G7Q13093 441 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 GAB1Q13480 694 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 PLA1AQ53H76 456 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 OR2B11Q5JQS5 317 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 KIAA1211LQ6NV74 962 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 OLIG3Q7RTU3 272 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 LILRB2Q8N423 598 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 OR1S2Q8NGQ3 325 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 LPAR4Q99677 370 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 MED20Q9H944 212 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 SHROOM3Q8TF72 1996 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 CXCL2P19875 107 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 LSSP48449 732 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 SQSTM1Q13501 440 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 SERTAD2Q14140 314 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 Q6ZSR6 202 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 MEPCEQ7L2J0 689 aaKnown RBP14.84□□□□□ -0.03
NPHP3-201ENST00000337331 KLHDC8BQ8IXV7 354 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 SLC7A13Q8TCU3 470 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 RXFP4Q8TDU9 374 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 OR51M1Q9H341 326 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 KLK11Q9UBX7 282 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 MEGF11A6BM72 1044 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 HIDE1A8MVS5 230 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 CCSO14618 274 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 PHOX2AO14813 284 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 IGLV3-25P01717 112 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 PET100P0DJ07 73 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 ZNF16P17020 682 aaPredicted RBP14.84□□□□□ -0.03
NPHP3-201ENST00000337331 ADH6P28332 368 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 XCR1P46094 333 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 MECP2P51608 486 aaKnown RBP14.84□□□□□ -0.03
NPHP3-201ENST00000337331 AGFG1P52594 562 aaKnown RBP14.84□□□□□ -0.03
NPHP3-201ENST00000337331 RSPO2Q6UXX9 243 aaPredicted RBP14.84□□□□□ -0.03
NPHP3-201ENST00000337331 LRRC56Q8IYG6 542 aaPredicted RBP14.84□□□□□ -0.03
NPHP3-201ENST00000337331 OR5K2Q8NHB8 316 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 GHSRQ92847 366 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 MAP3K3Q99759 626 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 PRR14Q9BWN1 585 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 SLC5A7Q9GZV3 580 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 C2orf42Q9NWW7 574 aa14.84□□□□□ -0.03
NPHP3-201ENST00000337331 SCN7AQ01118 1682 aa14.83□□□□□ -0.03
NPHP3-201ENST00000337331 PHYHO14832 338 aa14.83□□□□□ -0.03
NPHP3-201ENST00000337331 PPP1R2P9O14990 202 aa14.83□□□□□ -0.03
NPHP3-201ENST00000337331 NPPBP16860 134 aa14.83□□□□□ -0.03
NPHP3-201ENST00000337331 HMGA1P17096 107 aaKnown RBP14.83□□□□□ -0.03
NPHP3-201ENST00000337331 NME2P22392 152 aa14.83□□□□□ -0.03
NPHP3-201ENST00000337331 TUBG1P23258 451 aa14.83□□□□□ -0.03
NPHP3-201ENST00000337331 HNRNPKP61978 463 aaKnown RBP eCLIP14.83□□□□□ -0.03
NPHP3-201ENST00000337331 HSD11B2P80365 405 aa14.83□□□□□ -0.03
NPHP3-201ENST00000337331 MELKQ14680 651 aa14.83□□□□□ -0.03
NPHP3-201ENST00000337331 OR1Q1Q15612 314 aa14.83□□□□□ -0.03
NPHP3-201ENST00000337331 GUCA2BQ16661 112 aa14.83□□□□□ -0.03
NPHP3-201ENST00000337331 FAM26DQ5JW98 314 aa14.83□□□□□ -0.03
NPHP3-201ENST00000337331 CST9Q5W186 159 aa14.83□□□□□ -0.03
NPHP3-201ENST00000337331 FAM26EQ8N5C1 309 aa14.83□□□□□ -0.03
NPHP3-201ENST00000337331 OR52R1Q8NGF1 315 aa14.83□□□□□ -0.03
NPHP3-201ENST00000337331 ADOQ96SZ5 270 aa14.83□□□□□ -0.03
NPHP3-201ENST00000337331 A0A1B0GUH1 482 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 TMEM218A2RU14 115 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 C7orf66A4D0T2 115 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 SYT5O00445 386 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 RAB3DO95716 219 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 GPR75O95800 540 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 MCATQ8IVS2 390 aaKnown RBP14.83□□□□□ -0.04
NPHP3-201ENST00000337331 PUSL1Q8N0Z8 303 aaKnown RBP14.83□□□□□ -0.04
NPHP3-201ENST00000337331 ADAMTS18Q8TE60 1221 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 DIO2Q92813 273 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms