RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SOHLH1Q5JUK2 328 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 NCMAPQ5T1S8 102 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 OR7E24Q6IFN5 339 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 ACOT7LQ6ZUV0 252 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 KLHDC8BQ8IXV7 354 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 LINC00469Q8N7U9 141 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 HSD17B11Q8NBQ5 300 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 OR14A16Q8NHC5 309 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 ISOC2Q96AB3 205 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 PITHD1Q9GZP4 211 aaPredicted RBP12.23□□□□□ -0.45
COL2A1-201ENST00000337299 ZFP64Q9NPA5 681 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 CA10Q9NS85 328 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 B3GALT1Q9Y5Z6 326 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 PMS2P2O95744 297 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 CXCL2P19875 107 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 ATP5A1P25705 553 aaKnown RBP12.23□□□□□ -0.45
COL2A1-201ENST00000337299 ACTR1BP42025 376 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 ACTR1AP61163 376 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 SNRPNP63162 240 aaKnown RBP12.23□□□□□ -0.45
COL2A1-201ENST00000337299 NTHL1P78549 312 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 HIST2H3PS2Q5TEC6 136 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 ZNF620Q6ZNG0 422 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 MUC20Q8N307 709 aaPredicted RBP12.23□□□□□ -0.45
COL2A1-201ENST00000337299 C17orf47Q8NEP4 570 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 OR2AJ1Q8NGZ0 328 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 NPRL2Q8WTW4 380 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 FBLIM1Q8WUP2 373 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 TM4SF18Q96CE8 201 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 ZDHHC12Q96GR4 267 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 SLC19A3Q9BZV2 496 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 Q9N2J8 555 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 ZNF443Q9Y2A4 671 aaPredicted RBP12.23□□□□□ -0.45
COL2A1-201ENST00000337299 CCL27Q9Y4X3 112 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 XIRP1Q702N8 1843 aaKnown RBP12.23□□□□□ -0.45
COL2A1-201ENST00000337299 PLPP1O14494 284 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 DVL2O14641 736 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 FCMRO60667 390 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 C1SP09871 688 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 CD22P20273 847 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 PTAFRP25105 342 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 SHEQ5VZ18 495 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 TANGO2Q6ICL3 276 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 SLC16A11Q8NCK7 471 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 OR5H2Q8NGV7 314 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 WFDC5Q8TCV5 224 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 ELP5Q8TE02 316 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 TMEM14AQ9Y6G1 99 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 COLEC10Q9Y6Z7 277 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 IFITM5A6NNB3 132 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 NME2P1O60361 137 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 HSD11B1P28845 292 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 C1orf94Q6P1W5 598 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 NIPAL3Q6P499 406 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 SLC35F3Q8IY50 421 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 FAM213BQ8TBF2 198 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 AKR1E2Q96JD6 320 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 CDC6Q99741 560 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 OR52A5Q9H2C5 316 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 PAPPAQ13219 1627 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 A0A087WV62 115 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 OPRD1P41143 372 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 P2RX1P51575 399 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 PDX1P52945 283 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 MCCD1P59942 119 aaPredicted RBP12.22□□□□□ -0.45
COL2A1-201ENST00000337299 CSNK2A1P68400 391 aaPredicted RBP12.22□□□□□ -0.45
COL2A1-201ENST00000337299 DEFB103AP81534 67 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 PDE7AQ13946 482 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 PLEKHN1Q494U1 663 aaPredicted RBP12.22□□□□□ -0.45
COL2A1-201ENST00000337299 ATRAIDQ6UW56 229 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 DPY19L4Q7Z388 723 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 RASGRP3Q8IV61 690 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 CSNK2A3Q8NEV1 391 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 SLC25A19Q9HC21 320 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 KCNIP3Q9Y2W7 256 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 OR6C68A6NDL8 312 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 SURF4O15260 269 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 OR2F2O95006 317 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 OR4E1P0C645 316 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 OR2T7P0C7T2 308 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 PI3P19957 117 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 GZMMP51124 257 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 GPM6BQ13491 265 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 OR2F1Q13607 317 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 SLC39A5Q6ZMH5 540 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 BAP18Q8IXM2 172 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 OR2T27Q8NH04 317 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 CBLCQ9ULV8 474 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 LOXHD1Q8IVV2 1947 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 SNRPGP15A8MWD9 76 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 CLDN4O14493 209 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 FFAR1O14842 300 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 CHRM4P08173 479 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 DAOP14920 347 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 AVPR2P30518 371 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 RIDAP52758 137 aaKnown RBP12.22□□□□□ -0.45
COL2A1-201ENST00000337299 FXYD4P59646 89 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 EXOSC7Q15024 291 aaKnown RBP12.22□□□□□ -0.45
COL2A1-201ENST00000337299 TOMM20Q15388 145 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 Q499Y3 187 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 COX15Q7KZN9 410 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms