RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SERTAD2Q14140 314 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 SHBQ15464 509 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 SFRP4Q6FHJ7 346 aaPredicted RBP8.02□□□□□ -1.13
SNCA-201ENST00000336904 PWWP2BQ6NUJ5 590 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 FAM181AQ8N9Y4 354 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 MAFAQ8NHW3 353 aaPredicted RBP8.02□□□□□ -1.13
SNCA-201ENST00000336904 ZNF285Q96NJ3 590 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 EMC6Q9BV81 110 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 COPS7AQ9UBW8 275 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 MRM2Q9UI43 246 aaKnown RBP8.02□□□□□ -1.13
SNCA-201ENST00000336904 ICAM5Q9UMF0 924 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 SLC22A13Q9Y226 551 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 IGKV3D-11A0A0A0MRZ8 115 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 FLRT2O43155 660 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 AKR7A2O43488 359 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 TSC22D2O75157 780 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 SLC25A12O75746 678 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 HIST1H2ABP04908 130 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 CD14P08571 375 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 SPARCP09486 303 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 PRKAR1AP10644 381 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 BIKQ13323 160 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 COL19A1Q14993 1142 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.02□□□□□ -1.13
SNCA-201ENST00000336904 HSD17B12Q53GQ0 312 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 CORO6Q6QEF8 472 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 FCRLAQ7L513 359 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 HIST3H2AQ7L7L0 130 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 LINGO2Q7L985 606 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 FAM122BQ7Z309 247 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 PLXDC1Q8IUK5 500 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 LINC00346Q8IVM7 164 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 GPALPP1Q8IXQ4 340 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 OR14A16Q8NHC5 309 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 SLC7A6Q92536 515 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 HIST1H2ACQ93077 130 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 ZNF501Q96CX3 271 aaPredicted RBP8.02□□□□□ -1.13
SNCA-201ENST00000336904 SLC46A1Q96NT5 459 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 CDCP1Q9H5V8 836 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 MED29Q9NX70 200 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 ANKRD10Q9NXR5 420 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 FLVCR2Q9UPI3 526 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 EML6Q6ZMW3 1958 aa8.02□□□□□ -1.13
SNCA-201ENST00000336904 TRAV8-7A0A075B6U6 113 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 TCRBV16S1A1N1A0A5B0 115 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 HTR3EA5X5Y0 456 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 SUSD5O60279 629 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 SLC16A7O60669 478 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 OR2T7P0C7T2 308 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 EPXP11678 715 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 GIFP27352 417 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 ADH7P40394 386 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 CXCL12P48061 93 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 PITPNBP48739 271 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 CLDN6P56747 220 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 RPS4XP62701 263 aaKnown RBP8.01□□□□□ -1.13
SNCA-201ENST00000336904 PHF19Q5T6S3 580 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 OR7E24Q6IFN5 339 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 OR2T27Q8NH04 317 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 SLC39A7Q92504 469 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 RFT1Q96AA3 541 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 PHF21AQ96BD5 680 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 DDOQ99489 341 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 TAS2R5Q9NYW4 299 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 FRRS1LQ9P0K9 344 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 LAMP5Q9UJQ1 280 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 RALGAPA1Q6GYQ0 2036 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 BDP1A6H8Y1 2624 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 A0A1B0GX78 115 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 A0A1W2PQM1 296 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 ASAH2BP0C7U1 165 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 KLK2P20151 261 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 ACTC1P68032 377 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 ACTA1P68133 377 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 CCL7P80098 99 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 ELAVL1Q15717 326 aaKnown RBP8.01□□□□□ -1.13
SNCA-201ENST00000336904 ACKR1Q16570 336 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 COL28A1Q2UY09 1125 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 TMEM255AQ5JRV8 349 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 YOD1Q5VVQ6 348 aaPredicted RBP8.01□□□□□ -1.13
SNCA-201ENST00000336904 COX15Q7KZN9 410 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 SLC29A4Q7RTT9 530 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 C17orf82Q86X59 251 aaPredicted RBP8.01□□□□□ -1.13
SNCA-201ENST00000336904 SIAH3Q8IW03 269 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 TIGD4Q8IY51 512 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 CMTM4Q8IZR5 234 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 EID2Q8N6I1 236 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 ZNF417Q8TAU3 575 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 SETD6Q8TBK2 473 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 METTL21AQ8WXB1 218 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 RNF166Q96A37 237 aaPredicted RBP8.01□□□□□ -1.13
SNCA-201ENST00000336904 ZNF587Q96SQ5 575 aaPredicted RBP8.01□□□□□ -1.13
SNCA-201ENST00000336904 SOSTQ9BQB4 213 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 RBFOX1Q9NWB1 397 aaKnown RBP8.01□□□□□ -1.13
SNCA-201ENST00000336904 SLCO1C1Q9NYB5 712 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 COLQQ9Y215 455 aaPredicted RBP8.01□□□□□ -1.13
SNCA-201ENST00000336904 NUP210LQ5VU65 1888 aa8.01□□□□□ -1.13
SNCA-201ENST00000336904 FRG2CA6NGY1 282 aa8□□□□□ -1.13
SNCA-201ENST00000336904 SC5DO75845 299 aa8□□□□□ -1.13
SNCA-201ENST00000336904 GLCEO94923 617 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms