RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 WDPCPO95876 746 aa15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 HPXP02790 462 aa15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 NGFRP08138 427 aa15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 SRMP19623 302 aa15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 BTF3P20290 206 aaKnown RBP15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 TMEM69Q5SWH9 247 aa15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 PARM1Q6UWI2 310 aa15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 APOOLQ6UXV4 268 aa15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 OR2T4Q8NH00 348 aa15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 OR52I2Q8NH67 350 aa15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 MRPL48Q96GC5 212 aaKnown RBP15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 SPACA7Q96KW9 195 aa15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 ADAD1Q96M93 576 aaKnown RBP15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 SARGQ9BW04 601 aa15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 ZNF436Q9C0F3 470 aaPredicted RBP15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 SLITRK2Q9H156 845 aa15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 SFXN1Q9H9B4 322 aa15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 CAMK2AQ9UQM7 478 aa15.13■□□□□ 0.01
CDC42EP4-201ENST00000335793 ANXA2P2A6NMY6 339 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 TXNL1O43396 289 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 TMEM196Q5HYL7 178 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 FCRL6Q6DN72 434 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 LEG1Q6P5S2 330 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 KIRREL2Q6UWL6 708 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 RELL2Q8NC24 303 aaPredicted RBP15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 OR56B4Q8NH76 319 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 S100A16Q96FQ6 103 aaKnown RBP15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 EVA1AQ9H8M9 152 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 NRIP3Q9NQ35 241 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 A0A0A6YYC8 382 aaPredicted RBP15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 A0A0B4J2E0 115 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 A0A1B0GX12 115 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 I3L1I5 382 aaPredicted RBP15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 ZNF593O00488 134 aaPredicted RBP15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 RLN1P04808 185 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 MMP15P51511 669 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 GSG1Q2KHT4 349 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 PRICKLE4Q2TBC4 344 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 ELP2Q6IA86 826 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 DGAT2L6Q6ZPD8 337 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 FAM220AQ7Z4H9 259 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 SLITRK4Q8IW52 837 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 NT5CQ8TCD5 201 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 FGF14Q92915 247 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 TCEAL3Q969E4 200 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 C20orf85Q9H1P6 137 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 TSPAN10Q9H1Z9 355 aaPredicted RBP15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 MGAT4CQ9UBM8 478 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 FMO6PO60774 539 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 MAS1P04201 325 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 ACAA1P09110 424 aaPredicted RBP15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 OR8G3PP0DMU2 310 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 GAAP10253 952 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 RPS27P42677 84 aaKnown RBP15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 PPP1CAP62136 330 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 ULK3Q6PHR2 472 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 HAGHLQ6PII5 290 aaPredicted RBP15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 TAF8Q7Z7C8 310 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 ZNF565Q8N9K5 539 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 FCAMRQ8WWV6 532 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 AKAP7Q9P0M2 348 aaPredicted RBP15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 NCDNQ9UBB6 729 aa15.12■□□□□ 0.01
CDC42EP4-201ENST00000335793 PLRG1O43660 514 aaKnown RBP15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 AK1P00568 194 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 CD53P19397 219 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 GRK6P43250 576 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 OTPQ5XKR4 325 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 RPL22L1Q6P5R6 122 aaKnown RBP15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 BTN2A1Q7KYR7 527 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 BMPERQ8N8U9 685 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 NSMAFQ92636 917 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 STACQ99469 402 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 SLC38A3Q99624 504 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 ZNF275Q9NSD4 429 aaPredicted RBP15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 FBXL21Q9UKT6 434 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 KLF2Q9Y5W3 355 aaPredicted RBP15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 TVP23AA6NH52 213 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 C2orf74A8MZ97 194 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 HRKO00198 91 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 SPP1P10451 314 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 SNRPEP62304 92 aaKnown RBP15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 MAT1AQ00266 395 aaKnown RBP15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 OC90Q02509 493 aaPredicted RBP15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 CAMK2DQ13557 499 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 HYAL4Q2M3T9 481 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 FAM109BQ6ICB4 259 aaPredicted RBP15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 DNAAF1Q8NEP3 725 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 SYNPRQ8TBG9 265 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 Q96M85 177 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 JAM3Q9BX67 310 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 BIN3Q9NQY0 253 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 GLS2Q9UI32 602 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 ST6GALNAC2Q9UJ37 374 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 TMEM72A0PK05 275 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 C7orf66A4D0T2 115 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 ELOA3DA6NLF2 546 aaPredicted RBP15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 H7C1C5 153 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 KRT33AO76009 404 aa15.11■□□□□ 0.01
CDC42EP4-201ENST00000335793 HLA-DQA2P01906 255 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms