RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TMEM164Q5U3C3 297 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 PPCDCQ96CD2 204 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 MRGPRX4Q96LA9 322 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 KCNA7Q96RP8 456 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 PIF1Q9H611 641 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 K7EQS6 105 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 ST6GAL1P15907 406 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 RIDAP52758 137 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 EMX2Q04743 252 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 ALKBH1Q13686 389 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 SMIM21Q3B7S5 101 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 FBXO46Q6PJ61 603 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM145Q8NBT3 493 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 WDR76Q9H967 626 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 TBC1D29Q9UFV1 150 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 MCTS1Q9ULC4 181 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 KCNK7Q9Y2U2 307 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM14AQ9Y6G1 99 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF729A6NN14 1252 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 EBLN1P0CF75 366 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 OXTRP30559 389 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 SSTR1P30872 391 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 PBX1P40424 430 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 AGFG1P52594 562 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 MAXP61244 160 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 GAGE2BQ13066 116 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 GAGE2EQ4V326 116 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 KHDC1Q4VXA5 237 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 OPN5Q6U736 354 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 WDR88Q6ZMY6 472 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 YRDCQ86U90 279 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZSCAN4Q8NAM6 433 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 LHPPQ9H008 270 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZFP14Q9HCL3 533 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 GAGE2DQ9UEU5 116 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 CNTNAP2Q9UHC6 1331 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 POP7O75817 140 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 TGM1P22735 817 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 EDNRBP24530 442 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 CDC25AP30304 524 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 NFATC4Q14934 902 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF770Q6IQ21 691 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 DLK2Q6UY11 383 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 FBXW12Q6X9E4 464 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 TXNRD3Q86VQ6 643 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 MUC15Q8N387 334 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC35G3Q8N808 338 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 AQP11Q8NBQ7 271 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 MRAPQ8TCY5 172 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 NMNAT2Q9BZQ4 307 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 NAA50Q9GZZ1 169 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 AGO1Q9UL18 857 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 GPR45Q9Y5Y3 372 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 C2orf72A6NCS6 295 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 TIGITQ495A1 244 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 PARM1Q6UWI2 310 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR2Y1Q8NGV0 311 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM163Q8TC26 289 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 SUSD6Q92537 303 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 TSLPQ969D9 159 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 IGSF8Q969P0 613 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 C5orf30Q96GV9 206 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 EFCAB11Q9BUY7 163 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 CALHM2Q9HA72 323 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 MYOZ1Q9NP98 299 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 METTL1Q9UBP6 276 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 TBX10O75333 385 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 XCR1P46094 333 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 CXCR3P49682 368 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 SELENOWP63302 87 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 ECM1Q16610 540 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF679Q8IYX0 411 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR10J5Q8NHC4 309 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 IL31RAQ8NI17 732 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 MAGIXQ9H6Y5 334 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZFP30Q9Y2G7 519 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 CHTOPQ9Y3Y2 248 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM189A5PLL7 270 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 BTNL10A8MVZ5 291 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM189-UBE2V1I3L0A0 370 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 CACNG3O60359 315 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 SORBS2O94875 1100 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 FTH1P19P0C7X4 201 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 TSFMP43897 325 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 HSD11B2P80365 405 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 RPEL1Q2QD12 228 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 RGMBQ6NW40 437 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 GCNT7Q6ZNI0 430 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC15A4Q8N697 577 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR8B3Q8NGG8 313 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 SSBP4Q9BWG4 385 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF275Q9NSD4 429 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 DHCR7Q9UBM7 475 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF407Q9C0G0 2248 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 CXorf65A6NEN9 183 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 MSTNO14793 375 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 NOBOXO60393 691 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 EIF1BO60739 113 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 PIPP12273 146 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 EFNA1P20827 205 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms