RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 ELAVL3Q14576 367 aaKnown RBP16.34■□□□□ 0.21
PRKCB-202ENST00000321728 HNRNPA1L2Q32P51 320 aaKnown RBP16.34■□□□□ 0.21
PRKCB-202ENST00000321728 BEX5Q5H9J7 111 aa16.34■□□□□ 0.21
PRKCB-202ENST00000321728 HAGHLQ6PII5 290 aaPredicted RBP16.34■□□□□ 0.21
PRKCB-202ENST00000321728 MOB3CQ70IA8 216 aa16.34■□□□□ 0.21
PRKCB-202ENST00000321728 TMED4Q7Z7H5 227 aa16.34■□□□□ 0.21
PRKCB-202ENST00000321728 ZBP1Q9H171 429 aa16.34■□□□□ 0.21
PRKCB-202ENST00000321728 PLEKHM1Q9Y4G2 1056 aa16.34■□□□□ 0.21
PRKCB-202ENST00000321728 TRAV18A0A075B6X5 111 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 A0A0D9SG52 128 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 ATG12O94817 140 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 RASGRP1O95267 797 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 CD3DP04234 171 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 CPMP14384 443 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 CSF2RAP15509 400 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 CMPK1P30085 196 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 GABRA3P34903 492 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 PLAURQ03405 335 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 LRRC37A5PQ49AS3 106 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 DEFB134Q4QY38 66 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 SPRED2Q7Z698 418 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 ZNF227Q86WZ6 799 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 ZNF75AQ96N20 296 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 ZNF471Q9BX82 626 aaPredicted RBP16.33■□□□□ 0.21
PRKCB-202ENST00000321728 RAB11FIP5Q9BXF6 653 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.33■□□□□ 0.21
PRKCB-202ENST00000321728 WDR13Q9H1Z4 485 aa16.33■□□□□ 0.21
PRKCB-202ENST00000321728 GGT3PA6NGU5 568 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 EIF4E2O60573 245 aaKnown RBP16.33■□□□□ 0.2
PRKCB-202ENST00000321728 DNAJB6O75190 326 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 PEBP1P30086 187 aaKnown RBP16.33■□□□□ 0.2
PRKCB-202ENST00000321728 AGTR1P30556 359 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 P2RY2P41231 377 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 VIPR2P41587 438 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 AKR1C2P52895 323 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 AKR1C1Q04828 323 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 CCDC157Q569K6 752 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 LILRA6Q6PI73 481 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 DNM1P46Q6ZS02 220 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 ANKRD33Q7Z3H0 272 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 FAM220AQ7Z4H9 259 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 GRASPQ7Z6J2 395 aaPredicted RBP16.33■□□□□ 0.2
PRKCB-202ENST00000321728 ZAR1Q86SH2 424 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 CCDC36Q8IYA8 594 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 SAMD14Q8IZD0 417 aaPredicted RBP16.33■□□□□ 0.2
PRKCB-202ENST00000321728 C12orf45Q8N5I9 185 aaPredicted RBP16.33■□□□□ 0.2
PRKCB-202ENST00000321728 RASD2Q96D21 266 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 C19orf53Q9UNZ5 99 aaPredicted RBP16.33■□□□□ 0.2
PRKCB-202ENST00000321728 OR10H1Q9Y4A9 318 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 CHD9Q3L8U1 2897 aa16.33■□□□□ 0.2
PRKCB-202ENST00000321728 EDDM13A0A1B0GTR0 161 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 ADAM11O75078 769 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 ADH5P11766 374 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 EFNB2P52799 333 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 EXOSC7Q15024 291 aaKnown RBP16.32■□□□□ 0.2
PRKCB-202ENST00000321728 ODF4Q2M2E3 257 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 SLAIN1Q8ND83 568 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 NPEPL1Q8NDH3 523 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 GAL3ST3Q96A11 431 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 TRPV4Q9HBA0 871 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 ZNF346Q9UL40 294 aaKnown RBP16.32■□□□□ 0.2
PRKCB-202ENST00000321728 TRAV8-7A0A075B6U6 113 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 OTOL1A6NHN0 477 aaPredicted RBP16.32■□□□□ 0.2
PRKCB-202ENST00000321728 GP1BAP07359 652 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 EPCAMP16422 314 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 TLX1P31314 330 aaPredicted RBP16.32■□□□□ 0.2
PRKCB-202ENST00000321728 UBE2IP63279 158 aaKnown RBP16.32■□□□□ 0.2
PRKCB-202ENST00000321728 ATXN7L3Q14CW9 347 aaPredicted RBP16.32■□□□□ 0.2
PRKCB-202ENST00000321728 OR2W3Q7Z3T1 314 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 LRRTM1Q86UE6 522 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 ZNF511Q8NB15 262 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 STEAP2Q8NFT2 490 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 OR51D1Q8NGF3 324 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 LRFN5Q96NI6 719 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 RXFP3Q9NSD7 469 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 ERVK-19Q9WJR5 959 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 ENTPD2Q9Y5L3 495 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 EYSQ5T1H1 3165 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 A0A1B0GTH9 108 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 TMEM72A0PK05 275 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 OR5H14A6NHG9 310 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 LDB3O75112 727 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 PAK4O96013 591 aaPredicted RBP16.32■□□□□ 0.2
PRKCB-202ENST00000321728 WASP42768 502 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 CNKSR3Q6P9H4 555 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 VN1R4Q7Z5H5 301 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 SHISA5Q8N114 240 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 CDRT4Q8N9R6 151 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 WFIKKN2Q8TEU8 576 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 MBNL1Q9NR56 388 aaKnown RBP16.32■□□□□ 0.2
PRKCB-202ENST00000321728 DUSP22Q9NRW4 184 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 FBXL21Q9UKT6 434 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 KCNK7Q9Y2U2 307 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 ZNF337Q9Y3M9 751 aa16.32■□□□□ 0.2
PRKCB-202ENST00000321728 CACNA1CQ13936 2221 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 ZNF860A6NHJ4 632 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 PRICKLE3O43900 615 aaPredicted RBP16.31■□□□□ 0.2
PRKCB-202ENST00000321728 TACSTD2P09758 323 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 OR4E1P0C645 316 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 SCRN3Q0VDG4 424 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms