RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 C4orf47A7E2U8 309 aa14.21□□□□□ -0.13
SHROOM1-201ENST00000319854 ARPC1BO15143 372 aaKnown RBP14.21□□□□□ -0.13
SHROOM1-201ENST00000319854 SLC25A25Q6KCM7 469 aa14.21□□□□□ -0.13
SHROOM1-201ENST00000319854 NIPAL3Q6P499 406 aa14.21□□□□□ -0.13
SHROOM1-201ENST00000319854 ZNF321PQ8N8H1 164 aa14.21□□□□□ -0.13
SHROOM1-201ENST00000319854 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.21□□□□□ -0.13
SHROOM1-201ENST00000319854 DGAT2Q96PD7 388 aa14.21□□□□□ -0.13
SHROOM1-201ENST00000319854 RCE1Q9Y256 329 aa14.21□□□□□ -0.13
SHROOM1-201ENST00000319854 PRELID3BQ9Y3B1 194 aa14.21□□□□□ -0.13
SHROOM1-201ENST00000319854 CELSR3Q9NYQ7 3312 aa14.21□□□□□ -0.13
SHROOM1-201ENST00000319854 TNRC18O15417 2968 aaPredicted RBP14.21□□□□□ -0.13
SHROOM1-201ENST00000319854 H3BSH0 61 aa14.21□□□□□ -0.14
SHROOM1-201ENST00000319854 SLC35E2P0CK97 266 aa14.21□□□□□ -0.14
SHROOM1-201ENST00000319854 HACD4Q5VWC8 232 aa14.21□□□□□ -0.14
SHROOM1-201ENST00000319854 KIRREL2Q6UWL6 708 aa14.21□□□□□ -0.14
SHROOM1-201ENST00000319854 ZNF454Q8N9F8 522 aa14.21□□□□□ -0.14
SHROOM1-201ENST00000319854 NRSN2Q9GZP1 204 aa14.21□□□□□ -0.14
SHROOM1-201ENST00000319854 ANKRD19PQ9H560 264 aa14.21□□□□□ -0.14
SHROOM1-201ENST00000319854 EVA1AQ9H8M9 152 aa14.21□□□□□ -0.14
SHROOM1-201ENST00000319854 ZNF223Q9UK11 482 aaPredicted RBP14.21□□□□□ -0.14
SHROOM1-201ENST00000319854 ZNF346Q9UL40 294 aaKnown RBP14.21□□□□□ -0.14
SHROOM1-201ENST00000319854 IGHV5-51A0A0C4DH38 117 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 A0A1W2PPC4 97 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 RIIAD1A6NNX1 92 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 AIPO00170 330 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 BHLHE40O14503 412 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 FOXS1O43638 330 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 RNH1P13489 461 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 IL9P15248 144 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 GALP22466 123 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 EPHA4P54764 986 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 OR12D2P58182 307 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 DHODHQ02127 395 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 NPSR1Q6W5P4 371 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 MEPCEQ7L2J0 689 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 CLRN3Q8NCR9 226 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 C16orf52Q8NHV5 167 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 OR1F2PQ96R84 312 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 FOXQ1Q9C009 403 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 DHCR7Q9UBM7 475 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 SIGLEC7Q9Y286 467 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 KLF2Q9Y5W3 355 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 FREM2Q5SZK8 3169 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 OR5K4A6NMS3 321 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 ARPC5O15511 151 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 ANXA7P20073 488 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 F8A1P23610 371 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 PYCR1P32322 319 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 CCR9P51686 369 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 AKR1D1P51857 326 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 OTPQ5XKR4 325 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 TTLL10Q6ZVT0 673 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 AHCYL2Q96HN2 611 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 C4orf36Q96KX1 117 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 GAL3ST4Q96RP7 486 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 TEAD3Q99594 435 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 PELOQ9BRX2 385 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 OR8D2Q9GZM6 311 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 HRASLSQ9HDD0 168 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 EXOSC3Q9NQT5 275 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 A0A087WV62 115 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 TGM6O95932 706 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 CSTAP01040 98 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 PTHLHP12272 177 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 TP53I3Q53FA7 332 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 ACTR6Q9GZN1 396 aa14.2□□□□□ -0.14
SHROOM1-201ENST00000319854 RCBTB2O95199 551 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 WDPCPO95876 746 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 S1PR1P21453 382 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 C2orf68Q2NKX9 166 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 SHISA6Q6ZSJ9 500 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 SSX6Q7RTT6 188 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 RELL2Q8NC24 303 aaPredicted RBP14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 OR52B4Q8NGK2 314 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 NR4A3Q92570 626 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 CTHRC1Q96CG8 243 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 STACQ99469 402 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 ZNF69Q9UC07 566 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 ZMIZ1Q9ULJ6 1067 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 MTCH2Q9Y6C9 303 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 CCDC85CA6NKD9 419 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 LDOC1O95751 146 aaPredicted RBP14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 IGF2P01344 180 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 PSMB1P20618 241 aaKnown RBP14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 CSNK1EP49674 416 aaKnown RBP14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 SLC22A10Q63ZE4 541 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 OR6K6Q8NGW6 343 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 SCARB1Q8WTV0 552 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 ORAI1Q96D31 301 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 SLC6A15Q9H2J7 730 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 IFT22Q9H7X7 185 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 DNAJB12Q9NXW2 375 aaKnown RBP14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 KLK11Q9UBX7 282 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 IER3IP1Q9Y5U9 82 aa14.19□□□□□ -0.14
SHROOM1-201ENST00000319854 OR2M5A3KFT3 312 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 OR6C65A6NJZ3 312 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 BLOC1S5-TXNDC5H3BN57 136 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 LYPD3O95274 346 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 GABRA1P14867 456 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 HPGDP15428 266 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms